Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02488 ATGGTCATGGTCTTTGGAGAGATCACAACCAAGGCCGAAGTAGACTACGAGAAGATTGTCCGTGAGACATGCCGCAACATTGGATTCATCTCTGATGATGTTGGTCTTGATGCTGACAAATGCAAGGTGTTGGTCAACATTGAGCAGCAGAGCCCTGATATCGCCCAGGGTGTGCACGGCCACTTCACCAAGCGCCCGGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACTGACGAAACCCCTGAATACATGCCGCTCAGCCATGTCCTTGCAACCAAACTTGGTGCTCGCCTTACCGAGGTTAGGAAGGATGGTACCTGCGCTTGGTTGAGGCCAGATGGTAAAACACAAGTAACTGTAGAATACAAAAATGACAACGGTGCCATGGTTCCAATCCGTGTTCACACTGTTCTAATTTCCACCCAACATGATGAGACTGTGAGCAATGACCAAATTGCTGCTGACCTTAAAGAGCATGTTATCAAGCCGGTCATTCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAACCCATCGGGTCGGTTCGTGATTGGTGGCCCCCATGGTGATGCTGGTCTCACTGGAAGAAAGATCATCATTGATACCTACGGTGGCTGGGGTGCTCATGGTGGTGGTGCCTTTTCAGGCAAGGACCCTACCAAGGTTGACAGAAGTGGTGCCTATATTGTGAGGCAGGCTGCAAAGAGCGTTGTGGCAAATGGGCTTGCCAGAAGGTGCATTGTCCAAGTTTCTTATGCCATCGGTGTCCCTGAGCCCTTGTCAGTCTTTGTTGACACCTATGGAACCGGAAAGATTCCTGATAAGGAGATTCTTCAGATTGTGAAGGAGAATTTCGACTTCAGACCTGGAATGATCACCATTAACTTGGACCTCAAGAGGGGTGGCCACAGGTTCCTGAAGACAGCTGCTTATGGACACTTCGGAAGGGATGACCCTGACTTCACATGGGAAGTGGTGAAGCCACTTAAGTCAGAGAAGCCTCAGGCCTAG 1032 0.5029 MVMVFGEITTKAEVDYEKIVRETCRNIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKDGTCAWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDDPDFTWEVVKPLKSEKPQA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02488 343 Gene3D - 1 230 - -
Phco2g02488 343 SUPERFAMILY S-adenosylmethionine synthetase 66 190 IPR022636 GO:0004478|GO:0006556
Phco2g02488 343 Gene3D - 91 193 - -
Phco2g02488 343 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 339 IPR002133 GO:0004478|GO:0005524|GO:0006556
Phco2g02488 343 ProSitePatterns S-adenosylmethionine synthase signature 2. 217 225 IPR022631 GO:0004478|GO:0006556
Phco2g02488 343 Pfam S-adenosylmethionine synthetase, N-terminal domain 1 52 IPR022628 GO:0004478|GO:0006556
Phco2g02488 343 SUPERFAMILY S-adenosylmethionine synthetase 1 60 IPR022636 GO:0004478|GO:0006556
Phco2g02488 343 ProSitePatterns S-adenosylmethionine synthase signature 1. 70 80 IPR022631 GO:0004478|GO:0006556
Phco2g02488 343 SUPERFAMILY S-adenosylmethionine synthetase 191 338 IPR022636 GO:0004478|GO:0006556
Phco2g02488 343 Gene3D - 68 331 - -
Phco2g02488 343 FunFam S-adenosylmethionine synthase 88 192 - -
Phco2g02488 343 Pfam S-adenosylmethionine synthetase, central domain 68 189 IPR022629 GO:0004478|GO:0006556
Phco2g02488 343 FunFam S-adenosylmethionine synthase 68 87 - -
Phco2g02488 343 CDD S-AdoMet_synt 1 334 - -
Phco2g02488 343 Pfam S-adenosylmethionine synthetase, C-terminal domain 191 331 IPR022630 GO:0004478|GO:0006556
Phco2g02488 343 NCBIfam methionine adenosyltransferase 1 337 IPR002133 GO:0004478|GO:0005524|GO:0006556
Phco2g02488 343 FunFam S-adenosylmethionine synthase 213 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02488 Phco-Chr2 54869483 54870514 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g01402 6 14196503 14197687 Phco2g02488 2 54869483 54870514 PCT