Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02432 ATGTCTTCAACCTTTTCACCCCTCGTTGCTGTCTTCCTCCTCCTCTTTCTGGTCCGCCACACGTGTGAGGCACGTGACGCATTCGCCTGTGACCCTAAAAATGCCGCCACTAAGAACTTGCCGTTTTGCAAGGTCTCAGTGGCGATAGCGGAGAGGGTGAAGGACCTGATCGGAAGGTTGACGCTTGAGGAGAAGGTTAGGCTTCTGGTGAACAATGCCGCGGCGGTTCCGCGGCTGGGGATGAAAGGTTACGAGTGGTGGTCGGAGGCACTCCACGGGGTTTCAAATGTGGGTCCCGGAGTCAAGTTTAATGCACAGTTCCCCGGCGCAACTAGCTTCCCCCAAGTCATCACAACCGCTGCTTCCTTCAACGCTTCTCTCTGGGAGTCAATCGGACGGGTTGTGTCGGATGAGGCAAGGGCCATGTACAACGGTGGAATTGCAGGGCTTACCTACTGGAGCCCAAACATTAACATTTTCAGGGATCCAAGGTGGGGCCGCGGACAGGAAACTCCCGGTGAGGACCCTGTGCTAGGCGGTATATATGCCGTTAGTTACGTTAGAGGACTACAGGGAACCCATGCTAACCGGTTGAAGGTTGCTGCTTGTTGCAAACACTTCACGGCTTATGACCTGGATAATTGGAAGGGCATGGATCGATTCCACTTTAATGCACAGGTAAGTAAGCAGGACATAGAGGATACATTCGACGTGCCATTCAGGATGTGTGTGAGCGAAGGGAAAGTAGCGAGTGTGATGTGTTCTTACAATCAAGTGAATGGAGTTCCTACTTGTGCGGACCCCAACCTCCTAAAGAATACACTTCGTGGCCTGTGGCAACTTGATGGCTACATTGTATCAGACTGTGACTCCGTTGGGGTGTTTTATAGTAATCAACATTATGCATCCACGCCAGAAGAAGCTGCCGCTGATGCCATTAAAGCAGGTTTGGATTTAGACTGTGGTCCTTTCCTAGCCGTCCACACGCAGGATGCTGTAACAAAGGGCTTGCTAAGCCAAGCTGACGTCGACGGGGCTTTGGTCAATACACTAACCGTCCAAATGAGGTTAGGGATGTTTGATGGAGAGCCATCGGCCCAAGAGTATGGCAAATTGGGCCCAAAAGATGTCTGCAAACCGGCCCATCAAGAACTCGCTCTTGAAGCTGCCAGACAAGGAATTGTGCTTCTTAAGAACACTGGTCCTGTTTTGCCTCTCTCCCAACAACCTCATCATACCGTGGCTGTCATTGGGCCCAATTCCAAAGCCAATGTTACAATGATTGGAAACTATGCTGGTATTGCTTGTGAATACACCAGCCCCTTACAAGGAATAGGAAGATATGCCCGGACTGTTCATCAGTTGGGTTGTGAAAATGTAGCTTGTAAGAATGATAACCTTTTCGGGTCCGCTATAAACGCAGCCCGTCAAGCGGATGCAACCGTTTTAGTTATGGGCTTGGACCAGTCCATCGAAGCTGAAACAGTGGACAGGACTCACTTGCTTTTGCCTGGGCGTCAACAAGACCTTGTTTCAAAAGTTGCAGCTGCCTCAAAGGGACCAACCATTTTGGTCCTAATGTCTGGTGGGCCTGTTGATATCACTTTTGCGAAGAATAACCCTCGAATCGTGGGCATTCTCTGGGCCGGTTATCCGGGCCAAGCTGGTGGTGCCGCCATTGCAGATATACTGTTTGGAACATCTAGCCCAGGGGGAAAGCTTCCTATGACATGGTACCCTCAAGAGTATCTGAGAAAGTTGCCAATGACAAAGATGGCAATGCGAGCAAGTAAATCAGCAGGGTATCCAGGAAGAACGTACAGATTCTACAAGGGTGAAGTGGTGTATCCATTTGGGCACGGTTTAACTTACACTCACTTTGTTCATACACTAGCAAGTGCTCCCACAGTGGTGTCAGTTCCCCTGAACGGTCATCGGCGTTCCAATGCCACCAACATTTCCAACAGGGCAATTAGAGTGACGCATGCGCGGTGTGACAACCTCTTCATCACCCTCCAGGTGGACGTTAAAAACGTGGGGTCCAGAGATGCCACGCACACGTTGCTAGTGTTCTCTGCTCCACCCGCAGCTGCTGGGCATTGGGCACTGGAGAAGCAACTTGTGGCCTTCGACAAAGTCCATGTTCCTGCCAAGGCTCAACACAGAGTTGGAATCCATATTCACGTGTGCAAGCTCCTAAGTGTAGTGGATAAATCTGGGATCAGAAGAATCCCATTGGGGCTACACAGTTTTAACATCGGTGATGTTAAACACTCGGTCTCACTTCAAGCTGCAGCACTCGGGATTATCAAATCCTGA 2319 0.5037 MSSTFSPLVAVFLLLFLVRHTCEARDAFACDPKNAATKNLPFCKVSVAIAERVKDLIGRLTLEEKVRLLVNNAAAVPRLGMKGYEWWSEALHGVSNVGPGVKFNAQFPGATSFPQVITTAASFNASLWESIGRVVSDEARAMYNGGIAGLTYWSPNINIFRDPRWGRGQETPGEDPVLGGIYAVSYVRGLQGTHANRLKVAACCKHFTAYDLDNWKGMDRFHFNAQVSKQDIEDTFDVPFRMCVSEGKVASVMCSYNQVNGVPTCADPNLLKNTLRGLWQLDGYIVSDCDSVGVFYSNQHYASTPEEAAADAIKAGLDLDCGPFLAVHTQDAVTKGLLSQADVDGALVNTLTVQMRLGMFDGEPSAQEYGKLGPKDVCKPAHQELALEAARQGIVLLKNTGPVLPLSQQPHHTVAVIGPNSKANVTMIGNYAGIACEYTSPLQGIGRYARTVHQLGCENVACKNDNLFGSAINAARQADATVLVMGLDQSIEAETVDRTHLLLPGRQQDLVSKVAAASKGPTILVLMSGGPVDITFAKNNPRIVGILWAGYPGQAGGAAIADILFGTSSPGGKLPMTWYPQEYLRKLPMTKMAMRASKSAGYPGRTYRFYKGEVVYPFGHGLTYTHFVHTLASAPTVVSVPLNGHRRSNATNISNRAIRVTHARCDNLFITLQVDVKNVGSRDATHTLLVFSAPPAAAGHWALEKQLVAFDKVHVPAKAQHRVGIHIHVCKLLSVVDKSGIRRIPLGLHSFNIGDVKHSVSLQAAALGIIKS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02432 772 FunFam probable beta-D-xylosidase 2 379 625 - -
Phco2g02432 772 SUPERFAMILY (Trans)glycosidases 40 393 IPR017853 -
Phco2g02432 772 SMART Fn3_like_2 686 757 IPR026891 -
Phco2g02432 772 FunFam probable beta-D-xylosidase 7 52 366 - -
Phco2g02432 772 Gene3D Immunoglobulins 648 768 IPR013783 -
Phco2g02432 772 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 394 627 IPR036881 GO:0004553|GO:0005975
Phco2g02432 772 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Phco2g02432 772 PRINTS Glycosyl hydrolase family 3 signature 113 132 IPR001764 GO:0004553|GO:0005975
Phco2g02432 772 PRINTS Glycosyl hydrolase family 3 signature 274 292 IPR001764 GO:0004553|GO:0005975
Phco2g02432 772 Gene3D - 379 625 IPR036881 GO:0004553|GO:0005975
Phco2g02432 772 PANTHER SUGAR HYDROLASE-RELATED 23 760 IPR044993 GO:0009044|GO:0045493
Phco2g02432 772 Pfam Glycosyl hydrolase family 3 C-terminal domain 394 624 IPR002772 GO:0004553|GO:0005975
Phco2g02432 772 Pfam Glycosyl hydrolase family 3 N terminal domain 107 349 IPR001764 GO:0004553|GO:0005975
Phco2g02432 772 Gene3D - 52 372 IPR036962 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02432 Phco-Chr2 54441659 54446455 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02432 2 54441659 54446455 Phco2g02432 2 54441659 54446455 ECH
Phco2g02432 2 54441659 54446455 Phco6g01470 6 15327905 15331655 PCT