Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02431 ATGGGTGCGTTACGCAAAAGCGACAGAATAAAAAATGAGCGATGGAGGGAGGTGGGAGAAGAAGGGACAACAATACACTTCTATGCTCCAACATTCAACAGATTAGCTCAAAAAATGGCCATTACTACTCACACTCTATCCGCCACAGACAAAAAACATTGGTGGCTTACCAATCGAAAGATTGTTGAGAAATACATTAAAGACGCTCGGAGTCTTATAGCCACGCAAGATCATAGGGAGATTGCTTCGGCTCTCAATCTTCTAGATGCGGCTCTGGCCATTTCTCCCAGGCTGGACCAAGCGCTTGAGCTCAGAGCCAGGGCTCTCCTCTATTTGCGCCGCTTCAAGGAGGTTGCCGATATGCTTCAGGACTACATTCCGAGCCTCAGAATCAGCGATGACTCATCCTCCTCCTCTGTTTCCTCCGACACCTCTTCGCAACAGCTTTCTAGAGAGGGAGTGAAGCTTCTCTCTTCCTATGAGTCGTCGGAGCGGGATCAGAGCTTCAAGTGCTTCTCTGTTTCCGACCTCAAGAAGAAGGTCATGGCAGGGCTGTATAAAACCTGCGAGAAGGAAGGGCAATGGAGATACTTGGTATTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACGGGAAAACGTCTTGCAAGCGCTACACTCCGGCGCGAGAGTGTGTGCTGGTCACAAGACAGCTTCAATGTTACGAACATCCAATTCTCCACCGACGCCACAAATGCGCCACCTACAACTCCACCGCGAACTCTTCTTGCGGCGGATTCCGAGAGCGTGACGCAACTTCTCGGCCACATAAAGTTCCTGCTCCGGCGACGCGCCGCCGCACTGGCCGCCCTCGATGCCGGACTTTACTCAGAAGCCATCCGCCACTTCTCGAAAATTGTGGACGGCCGGCGTAGCGCACCGCAGAGCTTCCTTGTCGAATGCTACATCCTCCGCGCCTCCGCGCACCGTTCCGCCGGTAGAATCGCAGAGTCAATTGCGGATTGTAACCGCACACTTGCTTTGGACCCCACTTGCATTCAAGCACTCGAAATCAGAGCTTCGCTCTTCGAAAGCATTCGTTGTTTACCCGACTCTCTTCACGACCTGGAACACTTGAAGCTTCTCTACAATTCAATTTTACGAGATCGCAAGCTTCCCGGTCCTGCGTGGAAGCGCCACAACGTGCGTTATAGGGAAATTCCTGGGAAACTCTGCACCCTCACTATTAAAATTCAAGAACTGAAACAGAAGCTAGCATCTGGAAAAACAGGGAACGTTGATTACTATGCTTTGATTGGTGTCCGACGAGGTTGTTCCCGGTCGGAGTTGGAGAGGGCTCACTTGTTGCTTTCCTTGCGGCACAAGCCTGATAAGGCAACAGGGTTCATCGAAAGGTGTGAGCTTGCGGATGAGCGTGATGTTGAGTCGGTTAAAGAGAGGGCGAAGATGTCATCTTTGTTGTTGTATAGATTGGTTCAGAAGGGTTACACTAATGTGATGAGTAACATCATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGGCTGCTTTGCTGGCTATTCAACTGCAGAAAGAGAAAGCCGATGAACCTGAGTCGTTGAGCAAGGTTGAGTGTACTAGGAGCAGTGCGGAGAATAATAATAATAACAATGATAATGATAATAACAATAATAATATTGCTCAAATGTCTGAAAATAGGTCCATGGTGTGTTCTTCTACTGTGAATCCGGCGATGTTTCAGGGCGTTTTCTGCCGTGACATTGCAGTGGTGGGGAACTTGCTTTCTCAGGTGGGATTTAATCGGTCCATGCCTGTGAAGTATGAAGCGTTGAGCTGTTGA 1866 0.4952 MGALRKSDRIKNERWREVGEEGTTIHFYAPTFNRLAQKMAITTHTLSATDKKHWWLTNRKIVEKYIKDARSLIATQDHREIASALNLLDAALAISPRLDQALELRARALLYLRRFKEVADMLQDYIPSLRISDDSSSSSVSSDTSSQQLSREGVKLLSSYESSERDQSFKCFSVSDLKKKVMAGLYKTCEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASATLRRESVCWSQDSFNVTNIQFSTDATNAPPTTPPRTLLAADSESVTQLLGHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRSAPQSFLVECYILRASAHRSAGRIAESIADCNRTLALDPTCIQALEIRASLFESIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTIKIQELKQKLASGKTGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKATGFIERCELADERDVESVKERAKMSSLLLYRLVQKGYTNVMSNIMDEEAAEKQRKKAALLAIQLQKEKADEPESLSKVECTRSSAENNNNNNDNDNNNNNIAQMSENRSMVCSSTVNPAMFQGVFCRDIAVVGNLLSQVGFNRSMPVKYEALSC 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02431 621 SUPERFAMILY TPR-like 286 381 IPR011990 GO:0005515
Phco2g02431 621 Gene3D Tetratricopeptide repeat domain 65 387 IPR011990 GO:0005515
Phco2g02431 621 SUPERFAMILY Chaperone J-domain 431 469 IPR036869 -
Phco2g02431 621 Gene3D DnaJ domain 420 572 IPR036869 -
Phco2g02431 621 MobiDBLite consensus disorder prediction 545 568 - -
Phco2g02431 621 CDD DnaJ 435 469 IPR001623 -
Phco2g02431 621 PANTHER OS01G0273500 PROTEIN 46 621 - -
Phco2g02431 621 SMART tpr_5 320 353 IPR019734 GO:0005515
Phco2g02431 621 Coils Coil 514 534 - -
Phco2g02431 621 MobiDBLite consensus disorder prediction 537 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02431 Phco-Chr2 54429498 54433158 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02431 2 54429498 54433158 Phco2g02431 2 54429498 54433158 ECH
Phco2g02431 2 54429498 54433158 Phco6g01472 6 15350536 15352976 PCT