Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02410 ATGCAACTGTTCTTGCACTGGATTCAGAACTTTGTTGACTCATTGCAGTTTCAACTTGTTGCTGCTCAAGCACACATGAAGGGTCTAGTGGCAGTGCTTTTACTTGTGGCAATATGCACTGCTGTGGAAAGCAACGGAGAAGAGAATGGTGGAGCATGTAAACGGAATGCGTTGAATGCTAGGCCTCACAGTGTGTCGATCTTGGAGTTTGGGGCTGTTGGAGATGGAATGACACTGAACACAGTGGCGTTCCAAAACGCAATATTTTATCTCAAGTCATTTGCTGACAAAGGGGGTGCCCAACTATATGTTCCACCTGGCACATGGCTTACTGGGAGTTTTAACCTCACCAGTCACCTCACTCTGTTCCTTGAGAGAGGTGCTACCATCGTTGCATCTCAGGATTATTCTCATTGGGATGTACTGGATTCCCTCCCTTCTTATGGTAGAGGAATTGGGAGATATCGCAGCTTAATCTATGGACAGAGTTTAAGCGATGTGGTAGTTACAGGTGATAATGGAACTATAAACGGGCAAGGTTCTATCTGGTGGAAGCTGTTCAGTTCTCATTCCTTAAACTACAGTCGACCAAATCTTGTAGAATTCGTTGATTCCGTTGATGTCATAATTTCCAATTTGACTTTTGTAGACTCTCCAGCTTGGGGCATCCATCCAGTATATTGCAGTAACGTTCAAATTCAAAACATTACTTCTCGTGCACCACCCGAATCCCCTTACACAAGTGGTATAGTTCCAGATTCTTCTAAGTATGTATGCATCGAGAACAGTAATATTAGCACTGGTCATGATGCAATTGTGTTGAAGAGTGGTTGGGATGAGTACGGAATTGCCTATGGAAAACCAACCTCCAGTGTCCACATCAGCAATGTTTACCTACAATCATCATCAGGTGCTGGCTTGGCTTTTGGGAGTGAGATGTCTGGGGGAATATCAGATATTATTGCAGAAAAGCTTCATATACTTAACTCGCCTATAGGCATTGAACTGAAGACAACTAGAGGCAGAGGTGGCTATATGAAAGGCATCTTCATTTCTGATGCAGAATTGGAAAACATTCACTTGGGAATAAGCATGACAGGATACTCCGGTTTCCATCCAGACGACAAGTATGACACAAGTGCACTTCCAGTTGTTGATAGCATTACTTTCAAGAATATGATGGGTGCAAATATTGATGTTGCTGGCAATGTTTCAGGAATAGTTGAATCACCATTCTCAACAATCTGTCTTTCAAACGTGACTTTTTTTCTCAGTTATGAGCTATCCCCTTCATGGTTCTGTTCTAATGTAATTGGTTTCTCCGAGGAGGTGATTCCTGAGCCATGTCCCGATCTCCAGAGCTCTTATTCCAATTTCTCCTTTTCTTGCTTTACTTCCCTATATCCACACTTTAGTAATGTCTCAGGCTCTTTAGATCAAGAATTATACAAAGCTGACAGTATTCTCCTTAATTCACAGTATATGATTGCTTCTGTTGACTTGCTTGGTATGGCAGAAGCATGCATGCTATACTTGACTAAATCTGATGGATTGCGAGAGGCCACCAATGCCATCAATGGCTGTGCATTGTCCCACTCCACCCTGGAGCTGGGAAACCTGAATCAGCTGGTTACATCACTTCAACTTTCTTACGTACCATCTAATTAA 1668 0.4263 MQLFLHWIQNFVDSLQFQLVAAQAHMKGLVAVLLLVAICTAVESNGEENGGACKRNALNARPHSVSILEFGAVGDGMTLNTVAFQNAIFYLKSFADKGGAQLYVPPGTWLTGSFNLTSHLTLFLERGATIVASQDYSHWDVLDSLPSYGRGIGRYRSLIYGQSLSDVVVTGDNGTINGQGSIWWKLFSSHSLNYSRPNLVEFVDSVDVIISNLTFVDSPAWGIHPVYCSNVQIQNITSRAPPESPYTSGIVPDSSKYVCIENSNISTGHDAIVLKSGWDEYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEMSGGISDIIAEKLHILNSPIGIELKTTRGRGGYMKGIFISDAELENIHLGISMTGYSGFHPDDKYDTSALPVVDSITFKNMMGANIDVAGNVSGIVESPFSTICLSNVTFFLSYELSPSWFCSNVIGFSEEVIPEPCPDLQSSYSNFSFSCFTSLYPHFSNVSGSLDQELYKADSILLNSQYMIASVDLLGMAEACMLYLTKSDGLREATNAINGCALSHSTLELGNLNQLVTSLQLSYVPSN 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02410 555 Pfam Glycosyl hydrolases family 28 156 437 IPR000743 GO:0004650|GO:0005975
Phco2g02410 555 Gene3D - 49 437 IPR012334 -
Phco2g02410 555 PANTHER PECTIN LYASE-RELATED 32 458 - -
Phco2g02410 555 SUPERFAMILY Pectin lyase-like 58 453 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02410 Phco-Chr2 54288728 54292401 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02410 2 54288728 54292401 Phco2g02410 2 54288728 54292401 ECH
Phco2g02410 2 54288728 54292401 Phco6g01507 6 15921613 15925152 PCT