Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02313 ATGACGGGGCAGGTCGTGGTCACCAGCGTTGGCGGATGCGGTGGTGGGAAGGGGCGGAGAGGCGGTGAAGAGGACCAAAACCCGGCGTCGCCTGTTGCGCTTCTGTTGGCGGCGCTGAGGAAATCGATGGTGGCTTGCAGTGTGGACAGTCCCGACGATGTAATCTCCGCTGTTCATCACCCCATGGAGATCGGATGGCCCACAAACGTCAAGCATGTTAGTCATGTCACTTTCGATCGCTTCAATGGGTTTCTGGGTCTTCCTCTTGAGTTAGAGGTTCATGTCCCCGCTCCTGTTCCCAGTGCTAGTGTTAGTGTGTTTGGCGTCTCAGCTGAATCAATGCAGTGTTCCTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTACTGCTAATGCAAGAGCGATTATACTCACAGGGTGGCCTAAAGGCCGAAGGTATATTTCGCATAAATCCAGAGAACAGTGAAGAGGAGCATTTAAGGGAGCAGTTGAATAAGGGTATTGTGCCTGATGACATTGATGTCCACTGCTTGGCGGGCCTAATCAAAGCATGGTTCAGGGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCTCCTGAGCAAGTTCTTGAGTGCAACACAGAAGAAGAGTCTGTTCAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCAGCCTTGCTCAACTGGGCTATTGATCTCATGGCTGATGTTGTAGCTGAAGAGGATTACAACAAAATGGATGCAAGAAACATTGCAATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCATTAACTGCTCTGATGCATGCGGTCCAAGTGATGAATTTACTGAAGACCCTAATACTGAAGACACTTAGAAAACGTGAAGAAACAGCCGAAGGAGGATATTCGCCCATGTTATTTCGTTCATCTGATCGCCAATCTGAGGATGACTATGATAGTCAGCAAGAAATGGATACAAGTGGTGATGAATTGAGAGAGACCAAGTCAGAAGAAGATGATGATGATGATCATAATGATGTTAACTATAGTCCTACCAGTGAAGAGGACGGGGAGGCTGATGCATCATCAGTAAGTGAGATAGTGGAATGCTTCTTGAAACGTTTGGATGAGAAAACAAAAAGATTATCGGAAGAACCTGTAGGGTATTTGCAAGAGAAGTTAGAGAGCCCCAAGAGTTTCTCTGTCTATAACTTGGAATCTGCTTTATCATTTACTGATATCAAAACTGAGAATTCGTGCTCAAGTTCCTCTTCGGAAGATGACTCAAGAACAACTCTTACTGCCGAGGAATCAAATGCTGACACAAGTAGTTCTTCAATGGGAAGCACAAGCACCAATGATGTGGAGATGATCGATAAATTCACAGATCCTGGTTCTCTAGTTCCACTGTTTGCATCTAGTTAA 1410 0.4574 MTGQVVVTSVGGCGGGKGRRGGEEDQNPASPVALLLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSEEEHLREQLNKGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVQLVKQLKPTESALLNWAIDLMADVVAEEDYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRKREETAEGGYSPMLFRSSDRQSEDDYDSQQEMDTSGDELRETKSEEDDDDDHNDVNYSPTSEEDGEADASSVSEIVECFLKRLDEKTKRLSEEPVGYLQEKLESPKSFSVYNLESALSFTDIKTENSCSSSSSEDDSRTTLTAEESNADTSSSSMGSTSTNDVEMIDKFTDPGSLVPLFASS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02313 469 SUPERFAMILY GTPase activation domain, GAP 105 283 IPR008936 -
Phco2g02313 469 SMART PBD_5 64 98 IPR000095 -
Phco2g02313 469 Gene3D CRIB domain 59 95 IPR036936 -
Phco2g02313 469 Pfam P21-Rho-binding domain 63 91 IPR000095 -
Phco2g02313 469 MobiDBLite consensus disorder prediction 410 452 - -
Phco2g02313 469 ProSiteProfiles Rho GTPase-activating proteins domain profile. 109 290 IPR000198 GO:0007165
Phco2g02313 469 CDD RhoGAP 126 276 - -
Phco2g02313 469 MobiDBLite consensus disorder prediction 294 358 - -
Phco2g02313 469 CDD CRIB 62 92 - -
Phco2g02313 469 Gene3D Rho GTPase activation protein 96 288 IPR008936 -
Phco2g02313 469 MobiDBLite consensus disorder prediction 410 469 - -
Phco2g02313 469 ProSiteProfiles CRIB domain profile. 64 77 IPR000095 -
Phco2g02313 469 PANTHER MKIAA1688 PROTEIN 23 422 IPR044785 GO:0005096
Phco2g02313 469 FunFam Rho GTPase-activating protein 5 94 287 - -
Phco2g02313 469 Pfam RhoGAP domain 126 260 IPR000198 GO:0007165
Phco2g02313 469 MobiDBLite consensus disorder prediction 305 328 - -
Phco2g02313 469 SMART RhoGAP_3 123 286 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02313 Phco-Chr2 53643135 53645720 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02313 2 53643135 53645720 Phco2g02313 2 53643135 53645720 ECH
Phco2g02313 2 53643135 53645720 Phco6g00884 6 8615925 8618741 PCT