Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02307 ATGCTGAGCGTGCTGCGCGTGCACCTCCCTTCTGATATTCCCATTGTAGGCTGTGAGCTCACGCCTTACGTGCTCCTACGCAGACCTGACAAGACCGTTACCACCGACGATGTCCCCGAAGCATCCCCGTTAGACGGCCATTTCTTGCTCTACAAGTGGTATCGAGTACAGAGTGATAAAAAGGTTGCTGTTTGTAGTGTACATCCATCTGAGCAGGCTACACTGCAGTGCCTTGGTTGTCTAAAGGCCAAAATACCTGTTGCCAAAAGTTACCACTGCACTCCAAAGTGTTTTTCAGACGCATGGCAGCATCATCGTGTCTTACATGACCGTGCTGCAAGTTCAGGTAATGAAAATGGAAATGAGGAAGAAGAGTTATTTGGGCGATTTAATAATTCTGGATCTGGATCAATCAATGCCACCTTATCTGCCTCTGCACCAAGTACTAGCTTGACAAATGGGTCAGCACCTGTGTATCCAGCAGCCATTACGCAACGAAGTGGTGGTGAAACTTGGTTTGAAGTTGGACGATCTAAGACATATACGCCAACAGCTGATGACATTGGCCATATCCTTAAATTTGAGTGTGCTGTAGTTGATGCAGAGACTAAACTTACTGTAGGGCACGCTAGCACTCTACTAACTTCCCGTGTCATTCCTGCCCCCTCGCCTAGCCCACGCCGGCTAATACCTGTTGATGGGATGGGTCATTTGGATGCTGATGGGCGTATAACATCGTCAGGAACTTTTACTGTTCTATCATACAACATATTGTCTGATTCATATGCGTCAAGTGATCTATACAATTACTGCCCTTCATGGGCTCTTTCCTGGCTGTATCGCAGGCAAAATTTGTTACGAGAAATAGTTGTTTACCGTGCTGATATTATTTGTCTTCAGGAGGTTCAAAGTGATCATTATGAAGAATTTTTTTCTCCTGAACTGGACAAACATGGCTATTATGGTCTTTACAAAAGGAAAACAAACGAGGTATATAGTGGCAACATGAATACAATTGATGGGTGTGCAACATTCTTCCGCAGAGATAGATTTTCTCATGTGAAAAAATATGAGGTTGAATTTAATAAGGCTGCACAGTCTTTAACAGATGCCGTGATTCCAACCACTCAGAAGAAAACTGCCTTGAATAGACTGGTTAAGGATAATGTTGCATTAATAGTTGTTTTAGAAGCAAAAGTTAACAATCAGCCTGTTGATAATCCTGGGAAGAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTTCATCAAGATTTAAAGGATGTCAAACTCTGGCAGGTGCACACTCTTTTGAAAGGATTGGAGAAAATTGCTGCTAGTGCAGACATTCCAATGTTGGTTTGTGGGGACTTTAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCAATGGGAAAGGTAGATCCATCCCATCCTGATTTAGCAGTTGATCCACTTAATATACTGCGTCCTCACAGCAAGTTGGTTCACCAGTTGCCACTGGTCAGTGCTTATTCTTCCTTTGCAAGAACAGCTGGTCTTGGATTTGAGCAGCATAAACGGAGACTAGACAATGCAACAAATGAACCTTTATTCACTAATGTAACCAGAGATTTTATTGGCTCTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTGTTGGAGCTATTGGATGAGGAGAGTTTGAGGAAAGACACAGCGCTTCCTTCTCCTGAATGGTCCTCTGATCATATAGCTCTGTTAGCCGAGTTTCGCTGCTGCAAGAATAGATCTAGGCGATGA 1803 0.4326 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVPEASPLDGHFLLYKWYRVQSDKKVAVCSVHPSEQATLQCLGCLKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASSGNENGNEEEELFGRFNNSGSGSINATLSASAPSTSLTNGSAPVYPAAITQRSGGETWFEVGRSKTYTPTADDIGHILKFECAVVDAETKLTVGHASTLLTSRVIPAPSPSPRRLIPVDGMGHLDADGRITSSGTFTVLSYNILSDSYASSDLYNYCPSWALSWLYRRQNLLREIVVYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYSGNMNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTAGLGFEQHKRRLDNATNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02307 600 FunFam Carbon catabolite repressor protein 4 1 219 598 - -
Phco2g02307 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 162 593 - -
Phco2g02307 600 SUPERFAMILY DNase I-like 246 594 IPR036691 -
Phco2g02307 600 CDD Deadenylase_CCR4 252 593 - -
Phco2g02307 600 Gene3D Endonuclease/exonuclease/phosphatase 220 599 IPR036691 -
Phco2g02307 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02307 Phco-Chr2 53598686 53603322 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02307 2 53598686 53603322 Phco2g02307 2 53598686 53603322 ECH
Phco2g02307 2 53598686 53603322 Phco6g00192 6 1855947 1861809 PCT