Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02292 ATGGATCTCCTAGTGGAAGAGAAACAAGACATTGATTCTCTTCCTTTGCATCAATTTCCAAAAATTTATATCAAAAGAAAAAGGCAAACCTTTCATGCCTATGTCTTCTTCTGCACCACCTTTTTTTGTTTATTTATAGCCACAACTTCAGAAGCCACACCAAGTAGTATTAATAATAACAACAACAATAATATAATAATTATAATCAAAAGTGAACCACTCAACTCATTCTTTCATCTTCCTCACTTCATCCCTTCAGTAGACCCTGCTCTGTTTCTTCTTCTTCTTCTTCACAAAATGATGCCTAAACCCATGAACGTTTTGACGACAAAGCCCTCACCTTTGAGTACCATGGTGCTGCTGCTGATCCTCTGCATTCTGGGTTTCTACGCTATGCATTTCCCTCACTCTTCTACACCTTCCTCCGCTTCCCAAAACCTCTCTCAGTTGGAAACACTATTTCTCTCCACTTCCTCAAACTCCACCATTTCTTCCTACCTCCGCGCCCTCACCCTGCACCCTCACCTCGCCGGAACAAAACCCGGCTCCGACATCGCCCGCTACGTCCTCAACCACTTCACTTCATTGGGACTCAAGGCTCACACCGCGACCTACACCACGCTCCTCTCTTTCCCAGTGCACTCCTCCCTCTCAGCTCATTTTAGCGAAGGAACCTCGGTGAACCTCCGTCTCACAGAGCCGACCGCCGCGGGCGTGGTTCCGGCGTACCACGCGTACTCGCCGTCGGGTGCGGTGCACGCGCCCGCGGTGTTCGCGAACTACGGGAGGGAGAGGGACTACCGTGTGCTTGGTGCGATGGGAGTGAACGTGAGCGGGTGCGTGGTGGTGGTGCGGAAGGGCGGGGAGATGGGGCGAGGCGCGGTAGTGGAGAGAGCGGAGGCGCACGGGGCGGCGGCGGTGCTGGTTTACGGCGAGGGTGACACGTGGAGGAAGGGGTTCGAGAGGGGGCACGTGATGAGGGGAGGAATAGGGGACCCACTTACTCCTGGTTGGGCTGGGATTGAGGGTGGCGAGACACTGGGATTGGAAGATAGTGAGGTTTTGAACAGGTTCCCCAAAATTCCATCTATGCCCTTGTCAGCTGAGGTGGCTGACTCTATTTTGTCCTCTCTTGGGGGCGCTCCTGTGCCCCTTGAATGGAGAGGCACCCTAAGGTCTAAGGTCAGGCATGTTGGTCCTGGCCCCACCATCCTCAATTTCACTTACCAGGGTGAAAAGAAGGTGGCCGCCATTCAAAATGTTTTTGCTGTCATAAAGGGGTCAGAAGAACCTGATCGATATGTTCTGCTTGGGAACCACAGAGATGCATGGACGTATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCACTGCTTGACATTGCTCGTCGGTTTTCTGTTCTACTGGGCTTGGGGTGGAAGCCAAGGAGGACAATAATTCTCTGCAGTTGGGATGCAGAGGAATTTGGGATGATAGGATCTACTGAATGGGTTGAACAAAACCTTATTAATCTGGGTTCCAAAGCTGTAGCATACCTTAATGTGGACTGTGCTGTTCAAGGCCCTGGTTTCTTTGTTGGTTCAACTCCTCAGCTAGACAATCTTATTCTTGAGGTCACAAAAAAGGTCAAGGATCCTGATTCTGAGGGCGTATCACTATATGAGAATTGGGCTGCCTCTTCTGCTGGAAGCAATAATATTCAGAGGCTGAGTGGAGTTGATTCTGATTTTGCTCCATTTGTGCAGCACGCAGGGGTTCCATCCATTGATATGTATTATGGAAGAGATTTTCCTGTCTATCACACTGCATTCGACTCCTATAACTGGATGGCAGAGTATGCAGATCCATTCTTCCACCGCCATGTTGCTGTTACGGGAGTTTGGGGGCTTCTAGCCCTTCACTTGGCCGGCGATTCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTACAGCTGTACAAGAACATTTTGAGCAACTTGATAGACCAGAAAATTTCCCTAGATCCATTAACTCTTTCAATAGAAGAATTTGCTTCTGCTGCCAAAGAAGTTGATGCTGAAGTAAAGAAACTGAGATTGCAAGAAACAGAAGGTTGTTTTGTAGATATGAAAAAGCGAGCATTGAATGATAGACTAATGCTTGCTGAAAAAGGGTTCTTGGATGCATATGGACTTCAAGGAAGACAGTGGTTCAAGCATCTGGTGTATGGACCTTCAAGCGACCATGAAAGGCTCAATTTCTTCCCTGGGATTTCTGATTCTATTACTAGTTCTACGGGTGTAACCGAAAGAGAAAGGCTAGCATCAATTCAACATGAGATCTGGAGGGTTGCCAGAGCCATTCATAGAGCTGCTTCTGCACTCAGAGGAGAATTCACTTAA 2388 0.4845 MDLLVEEKQDIDSLPLHQFPKIYIKRKRQTFHAYVFFCTTFFCLFIATTSEATPSSINNNNNNNIIIIIKSEPLNSFFHLPHFIPSVDPALFLLLLLHKMMPKPMNVLTTKPSPLSTMVLLLILCILGFYAMHFPHSSTPSSASQNLSQLETLFLSTSSNSTISSYLRALTLHPHLAGTKPGSDIARYVLNHFTSLGLKAHTATYTTLLSFPVHSSLSAHFSEGTSVNLRLTEPTAAGVVPAYHAYSPSGAVHAPAVFANYGRERDYRVLGAMGVNVSGCVVVVRKGGEMGRGAVVERAEAHGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGIEGGETLGLEDSEVLNRFPKIPSMPLSAEVADSILSSLGGAPVPLEWRGTLRSKVRHVGPGPTILNFTYQGEKKVAAIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSVLLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDNLILEVTKKVKDPDSEGVSLYENWAASSAGSNNIQRLSGVDSDFAPFVQHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYADPFFHRHVAVTGVWGLLALHLAGDSILPFNYVSYANELQLYKNILSNLIDQKISLDPLTLSIEEFASAAKEVDAEVKKLRLQETEGCFVDMKKRALNDRLMLAEKGFLDAYGLQGRQWFKHLVYGPSSDHERLNFFPGISDSITSSTGVTERERLASIQHEIWRVARAIHRAASALRGEFT 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02292 795 Coils Coil 676 696 - -
Phco2g02292 795 SUPERFAMILY Zn-dependent exopeptidases 159 639 - -
Phco2g02292 795 SUPERFAMILY Transferrin receptor-like dimerisation domain 642 793 IPR036757 -
Phco2g02292 795 SUPERFAMILY PA domain 208 422 IPR046450 -
Phco2g02292 795 Pfam Transferrin receptor-like dimerisation domain 667 790 IPR007365 -
Phco2g02292 795 Pfam PA domain 254 314 IPR003137 -
Phco2g02292 795 Gene3D - 215 411 - -
Phco2g02292 795 FunFam Os01g0740650 protein 411 642 - -
Phco2g02292 795 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 643 793 - -
Phco2g02292 795 Gene3D Zn peptidases 161 642 - -
Phco2g02292 795 Pfam Peptidase family M28 420 608 IPR007484 -
Phco2g02292 795 CDD M28_PSMA_like 418 643 - -
Phco2g02292 795 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 115 792 IPR039373 -
Phco2g02292 795 Gene3D - 645 795 IPR036757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02292 Phco-Chr2 53504383 53510052 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02292 2 53504383 53510052 Phco2g02292 2 53504383 53510052 ECH
Phco2g02292 2 53504383 53510052 Phco6g00165 6 1615774 1621254 PCT