Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02141 ATGGAACAAAACATGGATCTTCAAGAAGGAGAAATGTCAAAGGCCTTGGTTGCTTTACATCCAGATGCTGCACGCATTCCTACACAAAAGCTGAAGAATATGAGCAGCTTGAGAACAGAGCATTACGTTTATGAACTCCCTGATTCACATCCTCTTCTGAATGGGTGGGAACAGCGAGAACCAGATGATCCAGGGAAATATCTTCTAGCTATATGGACTCCAGGGGAGACAGCAGATTCCATACAACCACCAGAAAGAAAATGCAGCTCTCAGGACTGTGGACAGCTATGTAACGAAAATGAATGTTTTGCATGCAACAGTCTCCGTGAAGCAAATTCACAAATAGTTCGAGGAACACTCCTGATACCATGCCGAACAGCTATGAGAGGGACCTTTCCACTAAATGGGACCTATTTTCAAGTCAATGAGGTTTTCGCTGATAATGACTCAAGTATAAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTTCGTAGGAGAACAGTGTATTTTGGAACCTCCGTAACACACATATTTAGAGACCTATCAACACAAGAAATTCAACAATGCTTCTGGAGAGGTAAGATTTATCTCACAGAATGTAATCCTACTTACTGGTATTCAGATATCCAAGTTCAACTAGTTCTTTTTTTTATAATAAGCTCCATTAGATCGCAGACTTGTACGACTTTATAA 699 0.4092 MEQNMDLQEGEMSKALVALHPDAARIPTQKLKNMSSLRTEHYVYELPDSHPLLNGWEQREPDDPGKYLLAIWTPGETADSIQPPERKCSSQDCGQLCNENECFACNSLREANSQIVRGTLLIPCRTAMRGTFPLNGTYFQVNEVFADNDSSINPISVPRSWIWNLRRRTVYFGTSVTHIFRDLSTQEIQQCFWRGKIYLTECNPTYWYSDIQVQLVLFFIISSIRSQTCTTL 232
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02141 232 Pfam RRM in Demeter 118 199 IPR028925 -
Phco2g02141 232 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 197 IPR044811 GO:0019104|GO:0035514|GO:0080111
Phco2g02141 232 Pfam Permuted single zf-CXXC unit 84 115 IPR028924 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g02141 Phco-Chr2 52116450 52117979 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02141 2 52116450 52117979 Phco2g02141 2 52116450 52117979 ECH
Phco2g02141 2 52116450 52117979 Phco6g00605 6 5971822 5981907 PCT