Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02006 ATGGGGAGGAAGGGAAATTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCCGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGTCTCATACTCAGAAGCTGATAAGCTGCCGCCGCCACCACCACCACCTGTTCCTCTGCCAGAAGAGATTAAATTAACTGATATTGAAAATGAAATCAGTCATGATCATGATCATGTTGTTGAAGTTGTAACTGGCGCTGAAGCCGAGGACCCTGTTCCTCCTGTTCAGATAGAAACGGTTAGGGTTGAAGCTGCCCGGATTCCTCGTTTTTCCGGCAAACCAAATGATGCAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGTTGGTCAGGTTGAAATTATTGATGGAAGGGTCGGTTGTAAAACGCCAAGCCACTAGTACCCTTCGATCTATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGAATGTTGGAGGAAAATCAGGCTCTGCAGAGACAGCTGTTACAGAAGCATGCGAGAGAGCTTGAGAGTTTGCGGATGGGAGAAGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCTAAGTTGCTAAGCAAGTATGAAGCTGCTATGAGGAGAGAAAGAGCACTGGCTTATGCATTTACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCAATGTTCATGGATCCAACAAATCCTGCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGGCCATTAGAGAACCGTAGCCAGATGGATAAAGAGGTGAATGACCATGCATCCCTGAAAAGCTCAAGCCGCAGCATTACTGGTGGAGAGATCAGCAAATCGTTTGCTCGTTTCCAGCTCAATTCTGAAAAGCAATCTCCAACAGCCAGCCAAAATCCTGGCTCACCTAGCTTTCACTCCACTCCTTCCAAACGAGTTTCGGCATCTGCTAAGAAATCAAAGAAGGCAAGTCCAAGGGGCAGCTGGATTACAGACGAGGACTCTAAAAGCTTGGTCAGTGTACAGTCAGATCGGTTCCGGAGGCACTCGATCGCAGGTTCATCAGTGAGAGACGACGAGAGCCTTGCTAGCTCTCCAGCAATTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCCCAGAAAATGGAAAAACTGAGAAAGGATCCTTTGGGACTGCAAAGAAGCGGCTATCTTTCCCAGCTTCACCTTCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAATCAGCTTAAATGCCGAGTTATCTGTGGACAAGGTTGTGGACAGTTGA 1428 0.4706 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADKLPPPPPPPVPLPEEIKLTDIENEISHDHDHVVEVVTGAEAEDPVPPVQIETVRVEAARIPRFSGKPNDAVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSLNPMFMDPTNPAWGWSWLERWMAARPLENRSQMDKEVNDHASLKSSSRSITGGEISKSFARFQLNSEKQSPTASQNPGSPSFHSTPSKRVSASAKKSKKASPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPAIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPSRPRRHSGPPKVEISLNAELSVDKVVDS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02006 475 PANTHER IQ-DOMAIN 5-RELATED 1 456 - -
Phco2g02006 475 MobiDBLite consensus disorder prediction 322 462 - -
Phco2g02006 475 MobiDBLite consensus disorder prediction 402 426 - -
Phco2g02006 475 SMART iq_5 118 140 IPR000048 GO:0005515
Phco2g02006 475 Gene3D - 98 147 - -
Phco2g02006 475 MobiDBLite consensus disorder prediction 1 60 - -
Phco2g02006 475 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
Phco2g02006 475 MobiDBLite consensus disorder prediction 322 348 - -
Phco2g02006 475 ProSiteProfiles IQ motif profile. 122 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02006 Phco-Chr2 50759505 50762637 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02006 2 50759505 50762637 Phco2g02006 2 50759505 50762637 ECH
Phco2g02006 2 50759505 50762637 Phco6g00843 6 8276790 8279021 PCT