Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01783 ATGAGCTCCCTAAATCTTAAATATGATAGCAGCTCATTTCTCATTGACATAACCTCCACTGTTAATTACACCATCAACATAGCCAAAAAGAGATGGCGTTTTGCTTACACAGCAATTTATTCTAGGCGAGTCATGCTTGCCTTGGCCAAAGAAGTCATATCTAAGAGAAATACGAACACCCATCCTTACTCTAAACTCTTCCAAACCCAATCTTCAAGTCGCAGCAGTACTCTTGACATCATCGAGCCCCTGATTCCGCATGATGGGACCAATCATTATTCTTTGGTTCCTGATGTTGACAAGGCCAGGATTGCTAGTATGGTTAAGGACAAAAACTTGTTAGCCTTTGCAGAGTTTGGAGGAGTTGAAGGTGTTGCAAACATTCTTGGAGCCATTCCAGCAAAGGGAATTACTGGCAGCCATGATGATGTTGCCAAACGTACTGAAGTATTTGGTTCAAACACTTACCAGAGGCCACCGCCTAAGTTTTTCATGAGCTTTGTAGTGGAAGCTTTCAATGATACTACTATTCTGATCCTTCTTGTTTGCGCCGGTCTTTCCCTTGGTTTTGGCATAAAAGAACATGGCCCGGGGGAAGGCTGGTATGAAGGAGGGAGTATATTTCTAGCAGTGTTTCTGGTGGTGGTTGTGACCGCACTAAGCAACATCAGACAAGAGAGACAGTTTGACAAATTGTCTAAGATAAGCAACAACATCAAAGTAGAAGTTGTGAGAAATGGAAGGCCACAGCAAATATCCATCTTTGATGTTGTTGTGGGAGATATTGCATCCCTTAAGATTGGTGACCAGATTCCAGCTGATGGATTGTTCTTGAGTGGCCATTCTTTGCTAGTGGATGAATCAAGTATGACAGGTGAGAGCGACCATGTAGAAATTGAGCCTTCAAAAAGCCCCTTCTTGCTGTCTGGTGCAAAAGTGGTGGATGGCTATGGTCAGATGCTAGTGACATCTGTGGGAACTAACACAGCATGGGGTGAAATGATGAGCTCAATATCGCGAGACACCAAGGAAAGGACACCATTACAGGCTCGCCTTGATAAGTTAACCTCTTCTATTGGAAAGGTAGGCCTCACAGTTGCTTTTCTTGTTCTCATAGTCTTGTTAATTCGTTATTTTACTGGAAACACACAAGATGATAGTGGGAAGACAGAGTTCCAGGGGAGTAAAACCGATATAAACGACATTTTCAATGCCGTAGTGAGGATTGTTGCTGCTGCAGTGACTATTGTGGTGGTGGCAATCCCAGAGGGTCTGCCATTGGCTGTCACTCTCACTCTTGCTTACTCCATGAAAAGAATGATGGCAGACCAAGCAATGGTGAGGAAACTTTCTGCTTGCGAAACCATGGGGTCAGCTACAGTTATTTGCACGGATAAAACTGGTACCTTAACTTTGAATCAAATGAGAGTCACCAAGTTTTGGCTTGGCCTACAAAATGTTGTGGAAAATTTTTCCAATGCTATGGCCCCTAAAGTTCTTGAGTTATTCCAACAAGGAGTTGGCCTCAACACAACTGGCAGTATCTATAAACCTTCATCAACATCTGAACATGAAATTTCTGGTAGCCCAACAGAGAAAGCTATACTCTTGTGGGCCGTGTCAGATTTAGGCATGGACATGGATGAACTGAAGAGCACATACGAAGTTCTCCATGTTGAAACGTTTAACTCTGAAAAGAAACGAAGTGGAGTCGCAATAAGGAAGAAGACCAACAACACAGTTCACGTTCATTGGAAAGGGGCTGCAGAGATTATACTTGCAATGTGTTCACATTATATTGACAATGATGGCATGGAGAAGTCCCTTGATGAAGAAAGGAGTAAACTTGAAAATATAATTGAAGGCATGGCTGCCAGCAGCCTTAGATGTATTGCTTTTGCTCACATGCATATTTCAGACGATATTGATTATAACGATAAGGAGAAAGCACATCAAATCCTTAGAAAAGATGGCTTGACCTTGCTAGGTATTGTTGGCCTCAAGGATCCATGCCGACCCGACGTCAAGAAGGCTGTGGAAGCGTGTAGACTTGCAGGAGTTAGTATCAAGATGATCACAGGTGATAACATATTCACTGCAAAAGCAATAGCAACAGAATGCGGAATATTAGACTTTGATGGCCATGTGAGTGCGGGAGAAGTGGTGGAGGGTGTGGAATTCAGGAATTATTCTGAAGAAGAGAGAATAGAGAAAGTAGAGAAGATCCTCGTGATGGCAAGATCATCCCCTTTGGACAAACATTTAATGGTGCAATGCTTGAAAAAGAAAGGTCACGTTGTTGCAGTCACAGGAGATGGCACAAATGATGCACCTGCTTTGAAAGAAGCCGACATTGGACTTTCTATGGGGATCCAAGGAACTGAAGTTGCCAAGGAGAGTTCTGACATTGTTATCTTAGATGACAACTTCAGTTCTGTTGTCACTGTTTTAAGGTGGGGGCGGTGTGTTTACAACAACATCCAAAAATTCATCCAGTTTCAATTAACCGTGAATGTTGCAGCTCTAGTGATCAATTTTATTGCGGCTGTTTCTTCGGGAGATGTTCCCCTAACAACTGTTCAACTATTATGGGTAAATCTCATTATGGATACTCTAGGAGCATTGGCACTTGCTACAGAAAGACCTACAAAGGAGTTAATGGAGAAAAAGCCAGTGGGTAGGACTGAACCTCTTATTACTAGTATTATGTGGAGAAACCTTTTAGCCCAAGCCTTGTATCAGATTGCTGTCCTCTTGGTTTTACAATTCAATGGAAAGTCAATCTTCAATGTTAGAGAGGAGGTAAAGGATACTCTAATTTTTAATACTTTTGTTCTCTGCCAAGTATTCAACGAGTTCAACTCTAGAAGTATGGAGAAACTTAATGTATTCCAAGGCCTTCACAGAAACCACTTGTTTCTTGGAATTGTGGGGATTACTCTTGTTCTTCAAGTTGTGATGGTGGAACTCTTAAGGAAGTTTGCTGATACAGAGCGCTTAACATGGCAGCAATGGGGAATTTGTATTGGAATTGCAGTTGTGTCATGGCCAATTGCTTGGATTACAAAGCTCGTACCCGTGTCAGATAAACCGTTCTTCAGCCACGTTAAGTGGGTAAAATTATCGGTCTTCAAGATTAAGCATTATTTATAA 3153 0.4209 MSSLNLKYDSSSFLIDITSTVNYTINIAKKRWRFAYTAIYSRRVMLALAKEVISKRNTNTHPYSKLFQTQSSSRSSTLDIIEPLIPHDGTNHYSLVPDVDKARIASMVKDKNLLAFAEFGGVEGVANILGAIPAKGITGSHDDVAKRTEVFGSNTYQRPPPKFFMSFVVEAFNDTTILILLVCAGLSLGFGIKEHGPGEGWYEGGSIFLAVFLVVVVTALSNIRQERQFDKLSKISNNIKVEVVRNGRPQQISIFDVVVGDIASLKIGDQIPADGLFLSGHSLLVDESSMTGESDHVEIEPSKSPFLLSGAKVVDGYGQMLVTSVGTNTAWGEMMSSISRDTKERTPLQARLDKLTSSIGKVGLTVAFLVLIVLLIRYFTGNTQDDSGKTEFQGSKTDINDIFNAVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFWLGLQNVVENFSNAMAPKVLELFQQGVGLNTTGSIYKPSSTSEHEISGSPTEKAILLWAVSDLGMDMDELKSTYEVLHVETFNSEKKRSGVAIRKKTNNTVHVHWKGAAEIILAMCSHYIDNDGMEKSLDEERSKLENIIEGMAASSLRCIAFAHMHISDDIDYNDKEKAHQILRKDGLTLLGIVGLKDPCRPDVKKAVEACRLAGVSIKMITGDNIFTAKAIATECGILDFDGHVSAGEVVEGVEFRNYSEEERIEKVEKILVMARSSPLDKHLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVVTVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMEKKPVGRTEPLITSIMWRNLLAQALYQIAVLLVLQFNGKSIFNVREEVKDTLIFNTFVLCQVFNEFNSRSMEKLNVFQGLHRNHLFLGIVGITLVLQVVMVELLRKFADTERLTWQQWGICIGIAVVSWPIAWITKLVPVSDKPFFSHVKWVKLSVFKIKHYL 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01783 1050 Pfam Cation transporter/ATPase, N-terminus 120 187 IPR004014 -
Phco2g01783 1050 Pfam E1-E2 ATPase 239 441 - -
Phco2g01783 1050 FunFam Calcium-transporting ATPase 217 339 - -
Phco2g01783 1050 PRINTS H+-transporting ATPase (proton pump) signature 802 827 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco2g01783 1050 PRINTS H+-transporting ATPase (proton pump) signature 616 634 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco2g01783 1050 PRINTS H+-transporting ATPase (proton pump) signature 770 786 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco2g01783 1050 Pfam haloacid dehalogenase-like hydrolase 461 784 - -
Phco2g01783 1050 PANTHER CATION TRANSPORTING ATPASE 77 1028 - -
Phco2g01783 1050 Pfam Cation transporting ATPase, C-terminus 855 1025 IPR006068 -
Phco2g01783 1050 SFLD p-type atpase 445 823 IPR044492 -
Phco2g01783 1050 Gene3D - 170 1024 - -
Phco2g01783 1050 FunFam Calcium-transporting ATPase 473 670 - -
Phco2g01783 1050 SUPERFAMILY Calcium ATPase, transduction domain A 238 337 IPR008250 -
Phco2g01783 1050 Gene3D - 140 339 - -
Phco2g01783 1050 FunFam Calcium-transporting ATPase 787 1029 - -
Phco2g01783 1050 CDD P-type_ATPase_Ca_PMCA-like 144 903 - -
Phco2g01783 1050 PRINTS P-type cation-transporting ATPase superfamily signature 463 477 - -
Phco2g01783 1050 PRINTS P-type cation-transporting ATPase superfamily signature 685 695 - -
Phco2g01783 1050 PRINTS P-type cation-transporting ATPase superfamily signature 794 806 - -
Phco2g01783 1050 PRINTS P-type cation-transporting ATPase superfamily signature 663 674 - -
Phco2g01783 1050 PRINTS P-type cation-transporting ATPase superfamily signature 286 300 - -
Phco2g01783 1050 PRINTS P-type cation-transporting ATPase superfamily signature 770 789 - -
Phco2g01783 1050 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 470 667 IPR023299 GO:0000166
Phco2g01783 1050 NCBIfam HAD-IC family P-type ATPase 405 490 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco2g01783 1050 NCBIfam HAD-IC family P-type ATPase 742 850 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco2g01783 1050 NCBIfam HAD-IC family P-type ATPase 207 380 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco2g01783 1050 NCBIfam calcium-translocating P-type ATPase, PMCA-type 107 1027 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Phco2g01783 1050 SFLD C1.7: P-type atpase like 445 823 - -
Phco2g01783 1050 FunFam Calcium-transporting ATPase 665 815 - -
Phco2g01783 1050 SUPERFAMILY HAD-like 461 875 IPR036412 -
Phco2g01783 1050 ProSitePatterns E1-E2 ATPases phosphorylation site. 465 471 IPR018303 -
Phco2g01783 1050 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 1027 IPR023298 -
Phco2g01783 1050 Gene3D - 473 670 IPR023299 GO:0000166
Phco2g01783 1050 Gene3D - 460 815 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01783 Phco-Chr2 48384493 48387645 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01783 2 48384493 48387645 Phco2g01783 2 48384493 48387645 ECH
Phco2g01783 2 48384493 48387645 Phco6g00426 6 3996386 3997021 PCT