Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01735 ATGGCAAATCACCCAAGCTTCGGCGGTCGCAGTGGAGTTCGAGTGGTGGTCGCCGGAGACCGAGCCACCGGAAAATCGAGCCTGATAGCTGCCATCGCGACGGAGTCATTTCCCGAGTCCGTTACGCCGGTTATTCCGCCCACTCTCTTGCCCCCTGATTTCTACCCCGATAACGTTCCTCTTACCGTCATTGACACACCTTCCAGCTTGGACAAACAAAGCAAGCGTAACGAGGAGTTGAAAAGAGCTGATGCTGTAGTTTTAACCTATGCTTGCAACGACACGGCTTCGGTTTCTCGGTTGAGTTCTTACTGGTTCCCGGAACTGCAGAAGTTGGAGGTGAAGGTGCCTGTAGTTGTGGTTGGTTGCAAGCTGGATCTTAGGGATGAAAGCCAGCAAGTGAGCTTGGAGCGCCTCATGACACAGTTACTGCAACAGTTCAAAGAAATTGTCACGTGCATTGAATGCTCTGCTGCTACGCAATACCAGGTCCCTGAAGTTTTTTATTTTGCTCAAAAAGCGGTACTGCATCCAGTAGATCCATTGTATGATATTGGAAGTCAAGCTTTAACAGATCGATGTGTTAGGGCTTTGAGAAGAATATTTGTTCTTTGTGATCGTGACATGGATGAAGCCCTCAATGAAGCAGAACTAAATGATTTTCAGGTTAGATGTTTCAATGTACCATTGCAATCATCTGAAATAGCTGGAGTCAAATCAGTTGTACAGCAGAAAGTACCTGAAGGAGTCAACTCACTTGGTCTTACTTTTCCAGGATTTATTTGTGTTCATGCTATGTTCCTCAAAAAAGGGCGTCCAGAGACATTATGGGCTGTTCTAAGAAACTTTGGATATGATAATGATTTGAAACTGAAGGATGATTTTCTTCCTGTTCCGTCTAAGCACGCTTTGGATCAGAGTGTGGAGCTGACAGGTGAAGCTGTAGAGTTTCTAAATGGTATCTTTCGACTGTTAGATACAGATAAAGATCGAGCCCTACGACCTGCAGAAGTTGATAAGTTATTTTGTACTGCTCCAGAAAGTCCTTGGAATGATGCTCTGTATAAGGATGCTGCTGAGATGAATGACATGGGTTACCTATCTCTAAATGGATTTCTGTCACAGTGGGCCCTTATGACATTACTTGATCCACCGTGTAGCCTGGCTAATTTGATTTACATTGGATATAGTGGTAATCCTGCGGCAGCTCTCCGCGTTACTCGCAGAAGAGCAGTAGATCGCAAGAAGCAAGCAACAGAAAGGAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAAGTTCCGGGAAGTCTGCTCTGTTGGATTCATTATTGGGAAGGCCGTTCTCAAACAATTATATTCCATCAACAGTTGAGAGGTTTGCAGTAAATGCCATCGAATTAATTGGGGGAGCCAGAAAAACTCTTGTGTTGCAAGAGATACCAGAGAGTAAAGTATCAAACGTTTTGTCAAAAAAGGACTATTTGGCAGCATGTGATGTCGCTGTTTTTGTGTATGACAGCTCAGATGAACTTTCATGGAAGAAATCCCGAGATTTGCTTGAGAAGGTTGCTAGACAAGGAGATCTAACTGGTTATAGAGTTCCTTGTCTCCTTATTGCTGCTAAGGATGATTTAACTCCATATCTAAGGGCCGTACAAGATTCAGTAAAGGTTACTCAGGAATTGGGAATAGAGGCACCTATTCACGTAAGTATGAAATTAGGCGATTCAAGTAACGTGTACAATAAGATTGTCCACGCTGCTGAGCACCCTCATTTAAGCATTCCAGAAACAGAGATTGGGAAGAAAAGAAAACAATACCATCGGCTTCTTCAGCACTCTCTTGTTTTTGCCTCAGTTGGGACCGCTATGGCAGTTGTTGGTTTGGCAGCATGTCGTGCGTATGCAGTGAAGAAGAATTCTTCTGGTTAG 1932 0.4389 MANHPSFGGRSGVRVVVAGDRATGKSSLIAAIATESFPESVTPVIPPTLLPPDFYPDNVPLTVIDTPSSLDKQSKRNEELKRADAVVLTYACNDTASVSRLSSYWFPELQKLEVKVPVVVVGCKLDLRDESQQVSLERLMTQLLQQFKEIVTCIECSAATQYQVPEVFYFAQKAVLHPVDPLYDIGSQALTDRCVRALRRIFVLCDRDMDEALNEAELNDFQVRCFNVPLQSSEIAGVKSVVQQKVPEGVNSLGLTFPGFICVHAMFLKKGRPETLWAVLRNFGYDNDLKLKDDFLPVPSKHALDQSVELTGEAVEFLNGIFRLLDTDKDRALRPAEVDKLFCTAPESPWNDALYKDAAEMNDMGYLSLNGFLSQWALMTLLDPPCSLANLIYIGYSGNPAAALRVTRRRAVDRKKQATERNVFQCYVFGSKSSGKSALLDSLLGRPFSNNYIPSTVERFAVNAIELIGGARKTLVLQEIPESKVSNVLSKKDYLAACDVAVFVYDSSDELSWKKSRDLLEKVARQGDLTGYRVPCLLIAAKDDLTPYLRAVQDSVKVTQELGIEAPIHVSMKLGDSSNVYNKIVHAAEHPHLSIPETEIGKKRKQYHRLLQHSLVFASVGTAMAVVGLAACRAYAVKKNSSG 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01735 643 Gene3D - 10 180 IPR027417 -
Phco2g01735 643 Gene3D - 291 481 - -
Phco2g01735 643 SMART rab_sub_5 13 178 - -
Phco2g01735 643 FunFam Mitochondrial Rho GTPase 488 589 - -
Phco2g01735 643 PANTHER RHO FAMILY GTPASE 13 178 IPR003578 GO:0005525|GO:0007264
Phco2g01735 643 CDD Miro2 420 602 - -
Phco2g01735 643 PRINTS Transforming protein P21 ras signature 13 34 - -
Phco2g01735 643 PRINTS Transforming protein P21 ras signature 153 175 - -
Phco2g01735 643 PRINTS Transforming protein P21 ras signature 114 127 - -
Phco2g01735 643 Pfam EF hand associated 229 312 IPR013567 -
Phco2g01735 643 PIRSF Miro 9 643 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0005741|GO:0007005
Phco2g01735 643 Gene3D - 487 588 IPR027417 -
Phco2g01735 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 595 IPR027417 -
Phco2g01735 643 SUPERFAMILY EF-hand 191 385 IPR011992 -
Phco2g01735 643 ProSiteProfiles Miro domain profile. 10 177 IPR020860 GO:0003924|GO:0005525
Phco2g01735 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 209 IPR027417 -
Phco2g01735 643 Gene3D - 185 289 - -
Phco2g01735 643 SMART rho_sub_3 15 178 IPR001806 GO:0003924|GO:0005525
Phco2g01735 643 SMART ras_sub_4 14 178 - -
Phco2g01735 643 Pfam EF hand associated 350 417 IPR013566 -
Phco2g01735 643 Pfam Ras family 14 175 IPR001806 GO:0003924|GO:0005525
Phco2g01735 643 Pfam Ras family 428 553 IPR001806 GO:0003924|GO:0005525
Phco2g01735 643 FunFam Mitochondrial Rho GTPase 10 180 - -
Phco2g01735 643 FunFam Mitochondrial Rho GTPase 185 289 - -
Phco2g01735 643 FunFam Mitochondrial Rho GTPase 291 481 - -
Phco2g01735 643 ProSiteProfiles Miro domain profile. 421 590 IPR020860 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01735 Phco-Chr2 47657172 47665593 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01735 2 47657172 47665593 Phco6g00937 6 9090351 9106360 PCT