Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01724 ATGGGTAGCAGTCAAAGGTTTCTCGCCATGTCAGTTGCACCAGTTGAGAGTATTCCCTCATTGAGCAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCCAGTGCAGCATGTACTTGTGCAACGTTGTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAGAATGTATGTTCATCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTTCTGTTGGTGGATTCCGAAAATTTTATGCAGACTGTTTCCCGATTATTGTTAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCTTGAGTACCCGGACAATTGGACCGAAGCTGAGTATTATGGAGACAAGAATGAATCGGAAAACATCTGCCCATCAGATTTTGTTTCTATAATAGATATTAGGTTCAAGGGGAAACCGGTCTGTTCCAAAGTTCTTTGGGGAATTCCAAATGCAAATAGCTATGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATTTTCTCACCTATGCAGATAGAGATGATAACCATGATGGATCTGTTCACCTTTCTGTATCTGATGGTCTGCCACAGATTACATCCATGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCGGGAGCTCCGCGAAGGGCTCCAGCTCAGTTGGATTATAGTAAATAGGAAAATGAAACAAGCTGCAAATCTTGCTAGCTGGAGTCCTCTTGGTGGCCAAAGACACTGGCCAACAGATAGGGATTTTGTTATCCGCTTTGGATCAGTTCTACCTGCCAAGGACATTCTTCCTTGTCAAGTAGTGGAGTGTATCCTCATTATGAAGTTTAGAGTGGTTCAAACCGAGGAAGATGGGGTCCAAACCACCCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGCTTGCTTATACTTAAGGACGCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTTGAGTCTTGTCACATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAATGAAAGTAGGTTGGATAGACTTTGTATTCTGAGTGGCATTGCGGCGTTTATGACGTTCTGGTACTGCGTTTTATAA 1149 0.423 MGSSQRFLAMSVAPVESIPSLSSDLFYDIFRRLDGATLASAACTCATLCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADCFPIIVNKEVVEYQPNNYLEYPDNWTEAEYYGDKNESENICPSDFVSIIDIRFKGKPVCSKVLWGIPNANSYDGWFYNCPFRIDFLTYADRDDNHDGSVHLSVSDGLPQITSMERERKDGKLWRELREGLQLSWIIVNRKMKQAANLASWSPLGGQRHWPTDRDFVIRFGSVLPAKDILPCQVVECILIMKFRVVQTEEDGVQTTLKLTELSMQLEDMEGAHVNGRNSLLILKDALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01724 382 PANTHER F-BOX PROTEIN-RELATED 15 379 IPR045283 -
Phco2g01724 382 Gene3D - 9 115 - -
Phco2g01724 382 SUPERFAMILY F-box domain 15 88 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01724 Phco-Chr2 47547631 47549680 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01724 2 47547631 47549680 Phco2g01724 2 47547631 47549680 ECH
Phco2g01724 2 47547631 47549680 Phco6g01221 6 12217561 12223587 PCT