Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00752 ATGAGCCGTACAGTTCCTTCTCTCTCTCTGTCACCCGTTTCTTCTTTATTTCTTTGTCTTCCCTTCACTTCAATTGCAGCTTCCAGAGAACCCAAGCAGACCCTTTGTTTGTGTCCCCAGCAGCGTCAAAAAGAACCAAGCTTTCTTATACATATAACTACGTGCTGCAAGCTCAAAGTGTATCTGGCTTTGGTGGAAATGGTTGGGAAGGAGGGTTTGAGAACTGGGGTGCTGAACTTGAGTTTTGAAAAGCTTATGATGGTTGGTGGTGGTGAAGATAGTGGGAAAGGAGTGAACTTGAAAGCTGGGGTCATCACCGAATGGAAGGATATTCCAGTGGAGCTTTTGATGCAAATTTTGTCACTTGTGGATGATCAAACGGTGATCATAGCTTCTGAAGTTTGTCGTGGGTGGAGAGAGGCAATTTGCTTTGGCCTTACCCGGTTATCACTCTCATGGTGTAGCAAGAACATGAATAACTTGGTCCTATCTCTTGCTCCTAAATTTACAAAATTGCAAACTTTAATCCTTCGTCAAGACAAACCTCAACTAGAGGACAATGCTGTTGAGACTATTGCAAATTTCTGTCGTGAGCTTCAAATCCTGGACCTCAGCAAAAGTTTCAAGCTCACAGATCGTTCATTGTATGCCATAGCCCTAGGTTGTTGGCATCTTACAAAACTGAACATTAGTGGTTGTTCAGCCTTTAGTGACAGTGCTCTAGCTTCCCTAGCCAGTTTATGCAGAAAGCTAAAAATTTTGAATCTATGTGGATGTGTTAAAGCTGCATCTGACACCGCATTACAGGCAATTGGACGTTACTGTAATCAATTACAGTTTTTGAACCTTGGGTGGTGTGAAAATGTCAGTGATGTTGGAGTAATGAGTTTAGCATATGGCTGCCCTGATCTTCGAACACTAGACTTGTGTGGTTGTGTCCTTATAACAGATGACAGTGTAATTGCCTTGGCAAACAGATGTCCTCATCTTAGGTCCCTTGGACTGTACTACTGCCAAAATATAACAGACAGAGCAATGTATTCTTTGGCACAAAGCAAAGTGAAGAATAGAATGTGGGGGTCTGTGAAAGGTGGAAATGAAGAGGATGGATTAAGGAATCTGAACATTAGCCAATGCACAGCACTCACCCCTTCTGCTGTGCAGGCTGTATGTGACTCATCCCCTGCACTCCACACCTGTTCTGGAAGACACTCACTCATCATGAGTGGTTGTCTGAGTCTTACATCTGTGCATTGTGCATGTGCCTGTCCAAGCACACCGTGGTATCAGCACCATTCCTAA 1302 0.4363 MSRTVPSLSLSPVSSLFLCLPFTSIAASREPKQTLCLCPQQRQKEPSFLIHITTCCKLKVYLALVEMVGKEGLRTGVLNLSFEKLMMVGGGEDSGKGVNLKAGVITEWKDIPVELLMQILSLVDDQTVIIASEVCRGWREAICFGLTRLSLSWCSKNMNNLVLSLAPKFTKLQTLILRQDKPQLEDNAVETIANFCRELQILDLSKSFKLTDRSLYAIALGCWHLTKLNISGCSAFSDSALASLASLCRKLKILNLCGCVKAASDTALQAIGRYCNQLQFLNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSKVKNRMWGSVKGGNEEDGLRNLNISQCTALTPSAVQAVCDSSPALHTCSGRHSLIMSGCLSLTSVHCACACPSTPWYQHHS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00752 433 PANTHER UNCHARACTERIZED 299 417 - -
Phco2g00752 433 FunFam F-box protein SKP2B 143 361 - -
Phco2g00752 433 Pfam F-box-like 109 142 IPR001810 GO:0005515
Phco2g00752 433 Gene3D Ribonuclease Inhibitor 145 361 IPR032675 -
Phco2g00752 433 SMART LRR_CC_2 143 168 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 368 393 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 169 195 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 275 300 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 327 352 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 196 221 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 248 274 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 301 326 IPR006553 -
Phco2g00752 433 SMART LRR_CC_2 222 247 IPR006553 -
Phco2g00752 433 Pfam Leucine Rich repeat 327 350 IPR001611 GO:0005515
Phco2g00752 433 Pfam Leucine Rich repeat 301 324 IPR001611 GO:0005515
Phco2g00752 433 Pfam Leucine Rich repeat 275 298 IPR001611 GO:0005515
Phco2g00752 433 SUPERFAMILY RNI-like 136 351 - -
Phco2g00752 433 CDD F-box_AtSKP2-like 107 154 - -
Phco2g00752 433 SUPERFAMILY F-box domain 108 147 IPR036047 GO:0005515
Phco2g00752 433 Gene3D - 105 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00752 Phco-Chr2 8071572 8075087 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00752 2 8071572 8075087 Phco2g00752 2 8071572 8075087 ECH
Phco2g00752 2 8071572 8075087 Phco7g01333 7 12021799 12024411 PCT