Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00731 ATGTTATATTGCTCCCTTCAAAGTTCCAATTCTGACCCCAACCAAACCTTTCCTCAACGGAATCCACTAAACTCGCAATCTTTGTTTTCTTTAGAGAGAGAGAGAGAGAGACCGGAATCATTCTCCGATCCCGCCGGTGGTTCGGTTTATGGTCATCGGAGAGTCGCTGATCTCGTTTGGGTTTCGAATCGTCTTTGTCGGCGACCGGAGATGGTGAATTCCATGGTCGAGCGCGCCACGAGCGACATGCTCATAGGGCCCGATTGGGCCATGAACATCGAGATCTGTGACATGCTCAATCATGACCCTGGGCAAGCAAAGGATGTCGTGAAAGGGATAAAAAAGAAGATTGGAAGTAAAAATTCAAAAGTTCAACTTCTTGCACTAACTTTGTTGGAGACAATCATAAAGAATTGTGGAGATATTGTTCATATGCATGTTGCTGAGAGAGATGTGCTTCATGATATGGTAAAAATGGTGAAGAAAAAGCCTGATTTTCATGTCAAAGAGAAGATATTGATTCTTGTAGATACTTGGCAAGAAGCATTTGGAGGCCCGAGGGCAAGATATCCACAATATTATGCTGCATACCAGGAACTGTTGCGTGCTGGGGCAGTATTCCCTCAGAGATCGGAACAATCTGCACCTGTATTCACACCTCCGCAAACACAGCCATTGGCGTCATACCCTCAAAATATACGTGACTCAGATGCTCGTCAGGACCCAGCTGAATCCTCTGCTGAGTCTGAGTTTCCAACTCTAAGTTTGACTGAAATTCAGAATGCTCGTGGCATCATGGATGTTCTTGCAGAAATGCTCAATGCCTTAGACCCTAGTAACAAAGAAGGGATTAGACAGGAGGTTATTGTTGACCTGGTGGAGCAGTGTCGAACTTACAAGCAGAGAGTGGTACACCTTGTCAACTCAACTTCCGATGAATCACTGCTATGCCAAGGATTGGCCCTGAATGATGATCTGCAGCGTGTACTGGCCAAGCACGAATCTATTTCTTCAGGAACTTCAACCCAAAACCAAAATCACACAGAAAATTCAAAATCTGCCCTTCCTGGAGCTCTTGTAGATATTGATGCTCCTTTGGTTGATACTGGGGATACTAGCAAACAAACTATAGAGAGATCCTCTCCTAATGTTGAAGCAGAATCCCAAACAATGAATCAGTTGCTGCTTCCTGCGCCTCCAACTTCTAATGGTTCAACAATTCCTGCTAAGGTTGATCCCAAATTGGACCTACTCAGTGGCGATGACTATAACTCTCCAAAAGCAGATGCTTCAAATGCTCTTGTTCCTCTTGGAGAACAGTCACCTGCTAATCCTGTTTCTCAGCAGAAGGCCCTTGTTCTTTTTGATATGTTTTCTAATGAAAATAGTGCGCCTACATCTGTGAATAGCCAGCTGCCCCAGCCAGCTAATGTTGCTGGCCAAACCACTCCATATGCTCCCCAATTTCAACAACAGCAAACAGTCATATCTCAAGGTGGATTTTACCCCAATGGAAATGTCCCAAATGCAGGTTCGGCTCAGTATGAGCAACAATCTCTGTATACAGAGAGTACAGGTCGTGCCTGGAATGGTCAGGTTGCACAACCGCAGCAACAGCCACCTTCGCCTGTTTATGGTGCACAAAGCAGTGGATCATTGCCACCCCCTCCTTGGGAAGCTCAACTACCAGATAATGGAAGTTCAGTAGTCGGCGCTCAGTATCCATACGTGCAGAATGCTGCACATCCTCCGGGGTCTCAAACAATGGGCAATGACCAGGGTGTCGGCATGTATATGCAGCCAAATGCTAACAGCCATATGTCAGGAATGAATAACCATGTTGGAAGCAACCAAATGGGCTTGCAACCTCAGCATATGCAAGGTGTTGTTGCAGGACCCTACATGAGTATGGCTTCACATCAAATGCAGGGTGGTCCTGTGATGTATCCTCAACAAATGTACGGAAACCAATTTATGGGATACGGGTATGATCAGCAACAAAGAGTTCCATATATTGAACGGCAAATGTATGGTATGTCTGTGAGAGATGACAGTGCTTTGAGAAACTCTTACCCAGTTTCTACCACATCTTATGCTGCATCTGGGAAACCTTCCAAGCCTGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCAAAAGTGAAGCCCAATCCCACCCCAGGACGAGCTGGTAGCATGTAA 2202 0.4555 MLYCSLQSSNSDPNQTFPQRNPLNSQSLFSLERERERPESFSDPAGGSVYGHRRVADLVWVSNRLCRRPEMVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKKIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHDMVKMVKKKPDFHVKEKILILVDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLASYPQNIRDSDARQDPAESSAESEFPTLSLTEIQNARGIMDVLAEMLNALDPSNKEGIRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESISSGTSTQNQNHTENSKSALPGALVDIDAPLVDTGDTSKQTIERSSPNVEAESQTMNQLLLPAPPTSNGSTIPAKVDPKLDLLSGDDYNSPKADASNALVPLGEQSPANPVSQQKALVLFDMFSNENSAPTSVNSQLPQPANVAGQTTPYAPQFQQQQTVISQGGFYPNGNVPNAGSAQYEQQSLYTESTGRAWNGQVAQPQQQPPSPVYGAQSSGSLPPPPWEAQLPDNGSSVVGAQYPYVQNAAHPPGSQTMGNDQGVGMYMQPNANSHMSGMNNHVGSNQMGLQPQHMQGVVAGPYMSMASHQMQGGPVMYPQQMYGNQFMGYGYDQQQRVPYIERQMYGMSVRDDSALRNSYPVSTTSYAASGKPSKPEDKLFGDLVDMAKVKPNPTPGRAGSM 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00731 733 Pfam GAT domain 264 338 IPR004152 GO:0035091|GO:0043130
Phco2g00731 733 SMART VHS_2 72 204 IPR002014 GO:0035091|GO:0043130
Phco2g00731 733 PANTHER TOM1-LIKE PROTEIN 71 725 IPR044836 GO:0035091|GO:0043130|GO:0043328
Phco2g00731 733 MobiDBLite consensus disorder prediction 532 549 - -
Phco2g00731 733 MobiDBLite consensus disorder prediction 212 235 - -
Phco2g00731 733 Gene3D - 253 346 IPR038425 -
Phco2g00731 733 MobiDBLite consensus disorder prediction 462 482 - -
Phco2g00731 733 MobiDBLite consensus disorder prediction 1 24 - -
Phco2g00731 733 Gene3D - 66 218 IPR008942 -
Phco2g00731 733 CDD GAT_GGA-like_plant 258 336 - -
Phco2g00731 733 FunFam TOM1-like protein 2 71 218 - -
Phco2g00731 733 SUPERFAMILY ENTH/VHS domain 73 208 IPR008942 -
Phco2g00731 733 MobiDBLite consensus disorder prediction 212 251 - -
Phco2g00731 733 MobiDBLite consensus disorder prediction 532 570 - -
Phco2g00731 733 MobiDBLite consensus disorder prediction 370 389 - -
Phco2g00731 733 FunFam TOM1-like protein 2 252 342 - -
Phco2g00731 733 SUPERFAMILY GAT-like domain 211 339 - -
Phco2g00731 733 ProSiteProfiles GAT domain profile. 250 338 IPR004152 GO:0035091|GO:0043130
Phco2g00731 733 CDD VHS 72 202 - -
Phco2g00731 733 ProSiteProfiles VHS domain profile. 79 208 IPR002014 GO:0035091|GO:0043130
Phco2g00731 733 Pfam VHS domain 71 199 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00731 Phco-Chr2 7722899 7736469 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00731 2 7722899 7736469 Phco2g00731 2 7722899 7736469 ECH
Phco7g00905 7 7267536 7279611 Phco2g00731 2 7722899 7736469 PCT