Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01286 ATGGGGGACTTCAACCTGGCGCTGGTGATTGTGGCGATCGTGGTGTGCGTTATCGTATTCCTTGTTAACGTGTACCTCCTCGTCAATTACCAGCATCCTGATGACGTTAACCAGGCCTACTTCCCCAAATTCGTTGTCGTTTTGGGCCTCTCCGTCTCCGCCATCTCCATCCTCATGCTTCCCGCCGACGTTGCCAATCGCCAGGCCTGTCGGCACGCGATCTACAATGGCGCGTGCAACCTCACGCTCCCCATGAAGGACCTCTGGCTCGCGGTGTACATCCTCGACGCACTCCTCGTCTTCTTCGTCATCCCCTTTGCCATGTTCTACTACGAAGGCGACCAGGACAAGAGTGTTGGGAAGCGGATTAAGAGCGCGTTGTGTTGGATGGTGACTACTGCGATTGTGTGCGCTCTTGTTTTGGGGATTTTGTATGGAATTATTGGGAAGGTGGACTTTACTGTTAGGCATCTCTCTTCTTCCACAAGCTCATTTCCTAGCACATGGGAATTCAACAGTGGTCAACAATGTATTGGAAACACACATCAGTGTTCTGCATACTCTGCCAGTCCTGCATCAGAGAAAACGTGGACCATGCGTACTACCTTTCCAGAATATGTTGTTGCTCTTGCCACTATAGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATATTTTCATTCATTCGGCGTCCAAAGGCTGTTATCACTCGTTCACAGTATATCAAGGAAGCTACTGAACTGGGAAAAAAAGCAAAAGATCTGAAGAAAGCAGCTGAGTCACTTCATCAGGAAGAAAAAAGTGCTTCAAAGGGCAGGAAATTTCGTAAAAATGTGAAATCAGTGGAAAAGGAGTTGCTTCAATTAGAAGAAGATGTCAAGCTTCTTGAAGAGATGTACCCACAAGGAGAAAAGGCTGAGGCAACATGGGCACTAACAGTTCTAGGGTATCTGGCTAAACTTGTTTTGGGAATTTTAGGGTTAATCGTTTCTGTGGCATGGGTTGCTCATATAATTATCTATCTATTAGTTGATCCTCCTCTTTCTCCTTTCTTGAATGTGGTTTTTATCAAGCTGGATGATATCTGGGGTCTTCTGGGTACAGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGAGCCATGGTGCTTGGGCTGAGACTAGTTTTCATTACTATACATCCAATGAAGTGGGGAGCTACTCTCATGAACTCTTTTCTGTTCAATGTGGGGCTTATTCTTCTTTCTTCCATTAGTGTAATCCAGTTCTGCTCCACAGCATTTGCCTACTATGCTCAAGCAACTGCAGCACAGGAAATATTTGGCCACACCTTGGAGTCTCTTCGTGGAATTAAATATTTGTACAAGTACAACGTCTTCCAGATTGCCTTTGTTGCATTGGCTGGATTGACTTTTGTATATTATGCTGCCTTTGGATGGAGAAGAAAGAAGCCCAGTGGCAGGTTCCAATTGTCTACATGA 1527 0.4538 MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVSAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDALLVFFVIPFAMFYYEGDQDKSVGKRIKSALCWMVTTAIVCALVLGILYGIIGKVDFTVRHLSSSTSSFPSTWEFNSGQQCIGNTHQCSAYSASPASEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKDLKKAAESLHQEEKSASKGRKFRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAEATWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLVDPPLSPFLNVVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMVLGLRLVFITIHPMKWGATLMNSFLFNVGLILLSSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKPSGRFQLST 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01286 508 Coils Coil 255 275 - -
Phco1g01286 508 Pfam LMBR1-like membrane protein 284 486 IPR006876 -
Phco1g01286 508 Pfam LMBR1-like membrane protein 9 289 IPR006876 -
Phco1g01286 508 Coils Coil 282 309 - -
Phco1g01286 508 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01286 Phco-Chr1 23136340 23141359 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02219 3 48545544 48550251 Phco1g01286 1 23136340 23141359 PCT