Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00944 ATGGAAGCCAGAGAAGGTATCAGTTCTGGGGTTACAGTGATAGGTGCAGAAGCTCCATCAGCTTATCATGTGGCGCCAAGAAGTGAAGCTCCAAACCAGGTTCATGTCCCTGATGGTGGTGGAGGCGGTGGCGGCATTGGTGGTGCTGCAGCTATTGGTGTCTCACCTGTGAGTGTGGGGTTGGATGGAACAGCAAAGAAGAAACGGGGTAGACCAAGGAAATATGGGCCTGATGGGTCTGTTACTATGGCATTGTCACCAATGCCTATCTCGTCTTCTGCACCGTCTTCAAATAATTTTTCATCCGGCAAGCGGGGGAAAATGCGTGGTATGGAGTATAAGCAGTCGAAAAAACTTGGTTTGGATTATCTAGGTGACTTGAATGCATGCTCTGATGGTACAAATTTTATGCCACACATCATCACTGTCAATGCTGGTGAGGACATTACAATGAAGGTGATATCTTTCTCTCAACAAGGACCAAGAGCTATATGTATCTTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGACAGCCTGATTCTTCTGGGGGTACTTTAACTTATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGACAACCAAGGTACAAGAAGCAGGTCTGGTGGAATGTCAGTCTCGTTGGCTAGCCCTGATGGCCGTGTTGTCGGTGGTGGAGTTGCTGGTCTTCTTATAGCTGCTAGCCCTGTGCAGGTGGTGGTGGGAAGCTTTTTACCAAGCAGCCAGCAAGAAGAGAAACTAAAGAAGCCCAAGTCTACTGATTATGCAGCAGCAGCAGCCGCTGTTTCTCCAGTTATTGCAGTATCTCCTGCACCACCACCTCCACCACCACCACCTGCAACCAATGCTGAAAAAGAGGATGTGAATATTAATGTAATGGGTGGAGCACATGTGCTGCAAAATTCTGGAACTCTTAACTCTAACCTCAGCCCTCCCAATGCCTTTAGAAGAGACAACTGGGTCAACATGCACTCTATGCCAGACTCAAGAAAGTCAGCTACTGATATTAACATATCTTTGCCTGATTGTTAA 1074 0.4646 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPDGGGGGGGIGGAAAIGVSPVSVGLDGTAKKKRGRPRKYGPDGSVTMALSPMPISSSAPSSNNFSSGKRGKMRGMEYKQSKKLGLDYLGDLNACSDGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSSQQEEKLKKPKSTDYAAAAAAVSPVIAVSPAPPPPPPPPATNAEKEDVNINVMGGAHVLQNSGTLNSNLSPPNAFRRDNWVNMHSMPDSRKSATDINISLPDC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00944 357 MobiDBLite consensus disorder prediction 61 108 - -
Phco1g00944 357 FunFam AT-hook motif nuclear-localized protein 1-like 138 269 - -
Phco1g00944 357 CDD DUF296 138 251 IPR005175 -
Phco1g00944 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 324 IPR039605 GO:0003680
Phco1g00944 357 MobiDBLite consensus disorder prediction 85 104 - -
Phco1g00944 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 251 IPR005175 -
Phco1g00944 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 257 - -
Phco1g00944 357 ProSiteProfiles PPC domain profile profile. 133 275 IPR005175 -
Phco1g00944 357 Gene3D - 138 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00944 Phco-Chr1 9598481 9602860 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00944 1 9598481 9602860 Phco1g00944 1 9598481 9602860 ECH
Phco3g02440 3 50966598 50971653 Phco1g00944 1 9598481 9602860 PCT