Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00758 ATGACACACAAACGAGTGGAGCGCGTCCTCTGTGGAGAGACAACCCCACCAACACAACACGGGTGTTTGGTCTGTTTTGTTGTGGCGGCGGATGAATCTGACTTTGTTGTTTGTTGCTGTTGTTCTGCCAGGAAAACTCACCTACATGGGACACCAGTGTATTACTATTGCCCACCAACTTTAGAAGAGCGTGAGTCTTTGACATCTAATAATGGTGCCACTACTTCACTCACTACTGGATTGCTGGTAGGCTTGAACCTGGAAACTTCTTCCCCTGATACATACCAGCCCCCTCCTGCACCTCTACCATATGATATGGTCCTGGGAGGTCCAGCATCAACAAAATCTGAATCAGGCAGAGAAACAGTTAGTGCTACTAGCTTTGAGACATTAATTACATCTGAAGATCTTGAAGAATCTGACTGTAAAGCTAAAGCTATTTCAACACCTATATCTCCAAGCAAGGCAGAACTGTCAAAGTCAAAAGAATTTCATGCATTAGTGATAGAAGAAGAGGACGACTGTCCAATTTGTCTTGATGAATATGATGTTGAGAATCCAAAAACTCTGACAAAATGTGAACACCACTTTCACTTGTCTTGCATTCTTGATTGGATGGAAAGAAGTGACTTCTGTCCTATATGTGATCAGGAGATGATATTTGACCAGACACTGAACTAG 681 0.4288 MTHKRVERVLCGETTPPTQHGCLVCFVVAADESDFVVCCCCSARKTHLHGTPVYYYCPPTLEERESLTSNNGATTSLTTGLLVGLNLETSSPDTYQPPPAPLPYDMVLGGPASTKSESGRETVSATSFETLITSEDLEESDCKAKAISTPISPSKAELSKSKEFHALVIEEEDDCPICLDEYDVENPKTLTKCEHHFHLSCILDWMERSDFCPICDQEMIFDQTLN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00758 226 SMART ring_2 175 215 IPR001841 -
Phco1g00758 226 Pfam Ring finger domain 173 215 IPR001841 -
Phco1g00758 226 SUPERFAMILY RING/U-box 165 222 - -
Phco1g00758 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 222 IPR013083 -
Phco1g00758 226 ProSiteProfiles Zinc finger RING-type profile. 175 216 IPR001841 -
Phco1g00758 226 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 71 223 - -
Phco1g00758 226 FunFam Putative E3 ubiquitin-protein ligase RHB1A 151 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00758 Phco-Chr1 6961335 6963689 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02601 3 52636468 52638954 Phco1g00758 1 6961335 6963689 PCT