Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00572 ATGGAAAGCAAGCGCCACAGCATGAAGCAAAGCAGCATGGAGACAGAGTTTGAGGACTTGCTGCCAGTGATGGCAGAGAAGCTTGATGTGGAGTCCTTTGTGTCAGAACTGTGTGGTGGTTTCAAGCTTCTATCAGACCCAGAAACAGGTTTGATAACAAGTGAGAGTCTGAGGAGAAACTCAGCTCTTCTTGGTATAGAGGGCATGAGTATGGAGGATGCAGATGCTATGGTTAGACAAGGTGATCTTGATGGCGATGGAAAGCTTAATGAAACTGAATTTTGCATTCTCATGGTCAGGCTTAGCCCTGGAATGATGGAAGATGCTGAGTCATGGCTGGAAAAGGCAATTCATGAAGAACTTAGGAACTCCCCAACTTAG 381 0.4593 MESKRHSMKQSSMETEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRRNSALLGIEGMSMEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIHEELRNSPT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00572 126 SUPERFAMILY EF-hand 31 111 IPR011992 -
Phco1g00572 126 Gene3D - 14 125 - -
Phco1g00572 126 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Phco1g00572 126 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Phco1g00572 126 PANTHER CALCIUM-BINDING PROTEIN KIC 14 123 IPR044205 GO:0005509
Phco1g00572 126 Pfam EF-hand domain pair 48 100 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00572 Phco-Chr1 4875740 4876120 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00572 1 4875740 4876120 Phco1g00572 1 4875740 4876120 ECH
Phco11g01208 11 9033393 9033770 Phco1g00572 1 4875740 4876120 PCT