Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01208 ATGGAAATCAACCAATCCGCGAAAGAGACCATGGTGGAAGAAGAGTTCGAGGACTTGTTGCCAGTGATGGCAGAGAAGCTGGGTGTGGAGACCTTTGTGTCTGAGTTGTGTGGAGGTTTCAAGCTTCTGGCCGACCCAGAAACGGGTTTGATCAGTGGTGAGAGTCTGATGAGAAATTCAGCTCTATTGGGTATCGATGGGATGAGCAAAGAGGAAGCAGAGGCCATGGTTAGACAAGGTGATCTTGATAGGGATGGGAAGCTCAATGAGACTGAGTTTTGCATTCTTATGCTCAGGCTTAGCCCTGGGATCATGGAAGAAGCCGAGGCCTGGCTTCACAAGGCACTTCAACAAGACCTCACCAAATCCTCAACTTAA 378 0.4894 MEINQSAKETMVEEEFEDLLPVMAEKLGVETFVSELCGGFKLLADPETGLISGESLMRNSALLGIDGMSKEEAEAMVRQGDLDRDGKLNETEFCILMLRLSPGIMEEAEAWLHKALQQDLTKSST 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01208 125 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Phco11g01208 125 Pfam EF-hand domain pair 47 99 IPR002048 GO:0005509
Phco11g01208 125 Gene3D - 13 125 - -
Phco11g01208 125 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Phco11g01208 125 PANTHER CALCIUM-BINDING PROTEIN KIC 13 122 IPR044205 GO:0005509
Phco11g01208 125 SUPERFAMILY EF-hand 16 101 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01208 Phco-Chr11 9033393 9033770 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01208 11 9033393 9033770 Phco1g00572 1 4875740 4876120 PCT