Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00236 ATGGACAGAAACCAATCCCGCAGGCAAGTTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGGTTACTTGATGAACAGTTTATCCAACTGGAGGAATTGCAGGATGATGCAAATCCCAACTTTGTTGAGGAAATTGTGACCCTTCACTATCGTGATTCATCACGGCTAATCTCAAGCATAGAGCAGGCTCTCAAAGAGAGAAACCCTCTGGATTTTAACAAGCTGGACACTCTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTCAGGGAATATTGCAGGGTAGGAAATGCAGAAGGATGCATGAGGAGCTTCCAACAATTGAAGAAAGAATATGCAGCACTCAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCAAGGCAAGCTGGACCACAGGAAACAGCATGTCGCTCCAAATAA 456 0.4408 MDRNQSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLISSIEQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRVGNAEGCMRSFQQLKKEYAALRKKLEAYFQLARQAGPQETACRSK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00236 151 Gene3D HPT domain 1 147 IPR036641 GO:0000160
Phco1g00236 151 Coils Coil 110 137 - -
Phco1g00236 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Phco1g00236 151 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 5 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
Phco1g00236 151 Pfam Hpt domain 50 128 IPR008207 GO:0000160
Phco1g00236 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Phco1g00236 151 FunFam Histidine-containing phosphotransfer protein 4 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00236 Phco-Chr1 1673495 1674621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00236 1 1673495 1674621 Phco10g01868 10 40866859 40867946 ECH
Phco1g00236 1 1673495 1674621 Phco1g00236 1 1673495 1674621 ECH
Phco1g00236 1 1673495 1674621 Phco7g00962 7 7822069 7830206 ECH
Phco10g01868 10 40866859 40867946 Phco1g00236 1 1673495 1674621 PCT