Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01868 ATGGACAAAACCCATTCCAGGAGGCAGGTAGCTGCTATCAAACACTCCCTCTTTGATCAGGGATATTTGGATGAACAGTTTATCCAACTGGAAGAATTGCAGGATGATGCTAATCCTAACTTCGTTGAGGAAATTGTCACTCTTTACTACCGTGATTCCTCTAGGCTTATCTCAAACTTGGACCACGCACTGGAAAGGAACCCTCTTGATTTCAACAAGCTGGACACAATTATGCACCAGTTTAAAGGAAGCAGCTCAAGCATCGGAGCTAAAAAGGTGAAAGCAGAATGCACTCTGTTTAGGGAATATTGCAGGACAAGAAATGGAGAAGGATGCAGGAGGAGCTTCCAACAAATGAAGAAAGAATATGCAACACTGAGAAAGAAACTTGAAACATATTTTCAGCTGGCTAGGCAAGCTGGGCCCCAAGAGACAGCATTTCCACCCAAGTAA 453 0.4349 MDKTHSRRQVAAIKHSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNLDHALERNPLDFNKLDTIMHQFKGSSSSIGAKKVKAECTLFREYCRTRNGEGCRRSFQQMKKEYATLRKKLETYFQLARQAGPQETAFPPK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01868 150 Gene3D HPT domain 1 148 IPR036641 GO:0000160
Phco10g01868 150 FunFam Histidine-containing phosphotransfer protein 4 1 145 - -
Phco10g01868 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Phco10g01868 150 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 6 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
Phco10g01868 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Phco10g01868 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 139 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01868 Phco-Chr10 40866859 40867946 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00236 1 1673495 1674621 Phco10g01868 10 40866859 40867946 ECH
Phco10g01868 10 40866859 40867946 Phco10g01868 10 40866859 40867946 ECH
Phco10g01868 10 40866859 40867946 Phco7g00962 7 7822069 7830206 ECH
Phco10g01868 10 40866859 40867946 Phco1g00236 1 1673495 1674621 PCT