Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00232 ATGCTATCGCCGTTTTCGCCAATGCCGGAAATCCAAGTCGATTTCCGCGCGCCGCCGCCCTCTCCGGTGGCATCCGGCCGGAGATCCACCGTCACCAACGACGACGTTCTGACCGAGTTTCTAGAGGCTTCGCTCCGCGTCCCCGATCTGGTCCTGCCGGACAAGATCTTCCCCAAACAGAAACACCTCGACGCCCCTCCTGAGGTCGACTTCGTGTCGCTCTGCTTCCACCGCGACGACGCCCTCCGAGACGTCGTTTCCGATTCCCTCAGCAGGATCGGATGCTTCCAGCTTCTCAACCACGGGATACCGTCACAGCTCGTGGATTCCGCCGCCAAGGACGCCGCCGGAGTGTTCCAGGTGCCGCATGCAAAGCGTGCGGCAGCTACAAGGTCGCCGGAGAAGCCGTGGGGTTTCGAGGAGTATCACGCCGGAGAGGAAGAGGAAGAAGGCAGTGAAGAATTCGTGTGGTGCAATGAAGAGGAGTTGAAGTCGAAAATGGAGGGAATTTTGCCCATTGGATATCCAAATTTCAGTGAAAAGATGGAAAAGCTTATGTCATGCATAGAGATGGTGGCTATGAAAATGTTGGCTGTGATATTGAAAAAGAAGAGTGTAGAAATTGCGGATGGGCATGAGAAAGGGAATGTTTGTTGCATTTATAAGCATGGTGGTGATAATAGTAGGGATGCATGGGCTAATTCCTTGAAATATGAAGTGATTAGAATGCTGATTAGGGGAACAGAATACTCTCATTCATTGTGCTTCCATGTATGTAATGGTTCTTCACAGTTTCATGTTTACTCCAAGAAAAGTTGGCTCTCTTTCTGCCCTGAGCCAGGTGCCCTTATAGTCACTGCTGGAGATCAAATTCAGATACTGAGTGGTGGACAGTACAAAAATGTGATTGGAAGACCAATCTTTAAAGCAGAGAAAGAAGAGAGCATTTCAATGGCTTTCCTCTGTTCTGCTCAAAACAAGAAGAAGAACAATTTTGAAAGCAATAGGGATAAAACTATTTCACTTTCCCAGCAAGCCATATTGGCTTTAATTCTGCCCCTTGTGTACCATCTCATGATTCTTGTCTACAGAAAACTTAATCAATGA 1107 0.4842 MLSPFSPMPEIQVDFRAPPPSPVASGRRSTVTNDDVLTEFLEASLRVPDLVLPDKIFPKQKHLDAPPEVDFVSLCFHRDDALRDVVSDSLSRIGCFQLLNHGIPSQLVDSAAKDAAGVFQVPHAKRAAATRSPEKPWGFEEYHAGEEEEEGSEEFVWCNEEELKSKMEGILPIGYPNFSEKMEKLMSCIEMVAMKMLAVILKKKSVEIADGHEKGNVCCIYKHGGDNSRDAWANSLKYEVIRMLIRGTEYSHSLCFHVCNGSSQFHVYSKKSWLSFCPEPGALIVTAGDQIQILSGGQYKNVIGRPIFKAEKEESISMAFLCSAQNKKKNNFESNRDKTISLSQQAILALILPLVYHLMILVYRKLNQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00232 368 Gene3D - 67 341 IPR027443 -
Phco1g00232 368 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 7 361 - -
Phco1g00232 368 SUPERFAMILY Clavaminate synthase-like 57 328 - -
Phco1g00232 368 MobiDBLite consensus disorder prediction 1 30 - -
Phco1g00232 368 Pfam 2OG-Fe(II) oxygenase superfamily 256 322 IPR044861 -
Phco1g00232 368 Pfam non-haem dioxygenase in morphine synthesis N-terminal 78 156 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00232 Phco-Chr1 1632931 1634895 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00232 1 1632931 1634895 Phco1g00232 1 1632931 1634895 ECH
Phco10g01874 10 40925407 40926895 Phco1g00232 1 1632931 1634895 PCT