Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01874 ATGGATTTCCGAGCCCCGCCGCCATCTCCTGTGGCCTCTGCCAGGCGAACCTCCTCGCTCTCCAACGACGACGTTTTCCGCCGATTCTTGGAGACCTCTCTCCGTCTCCCAAACGTTAACAACCACCACCAAAAGCCGCTTCCAAAGGTTGACTTTCGCTCCTTATGTTCCGACCACGCTCTTCGTCACGTCATTTCGGACTCTTTCGCTGCTGTCGGGTGCTTCCAGCTGCTCAACCATGGGATTCCACTGGACGTGATCGCGTCGCCGGCGGAAGCTTCCATCGCAATTTTCCAGGTGCCGCCGGAGAAGCGAGGCGGCGCGACGAGGTCAGCGGAGAGTCCGTGGGGTTTCGAGGAAGATGATGAGTTCGTGTGGGGAAGAGATAAGGAATTCGACGTCAGAATGCAGCGACTTTCGCCAACCGGATATTCCAATTTCAATAAGAAGATGGAGAATCTAGTGGCCAGGATAGAGAAGGTGGCGGAGAAAATTTTGCAAGTGATATTCGAAGATTCTCCCCATAAAATTGCAAACTCTGTGGACATGATTGGTGGGCATGAACGTGGGACACTTTGTTCTGTTTATAAGCACTGCTCTGATAACATGTCAGGACAATGTGGTAACTCTGTGATTAGGATGCTGATTAGGGGAAACCAATACTCTCATTGCTTGTGCTTGCATCTATGTGATGGCTCTTCTGAGTTTCAGGTTTACTCTAAGAAAGGTTGGCTCTCTTTCTTCCCAGAAAAAGGAGCCCTTGTAATCACCGCTGGAGACCAAACTCAGATGTTGAGTGATGGGAACTACAAGCACGTGATTGGAAGGCCAATATTTGAAGGTCAGAAAGAGGACTACATTTCAATGGCTTTCCTCTATTCACCGCCAAAAAACAAGAACAATTTCCAAAACAGTAAGGAAAGAACTATTTCACTGGGCTTGCAGGTCATATTGGCTATGATTCTCACCCTTCTGTATCATGTCCTGATTTTTGTCTATAACTTTTTTTGA 1011 0.4817 MDFRAPPPSPVASARRTSSLSNDDVFRRFLETSLRLPNVNNHHQKPLPKVDFRSLCSDHALRHVISDSFAAVGCFQLLNHGIPLDVIASPAEASIAIFQVPPEKRGGATRSAESPWGFEEDDEFVWGRDKEFDVRMQRLSPTGYSNFNKKMENLVARIEKVAEKILQVIFEDSPHKIANSVDMIGGHERGTLCSVYKHCSDNMSGQCGNSVIRMLIRGNQYSHCLCLHLCDGSSEFQVYSKKGWLSFFPEKGALVITAGDQTQMLSDGNYKHVIGRPIFEGQKEDYISMAFLYSPPKNKNNFQNSKERTISLGLQVILAMILTLLYHVLIFVYNFF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01874 336 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 2 332 - -
Phco10g01874 336 Gene3D - 15 311 IPR027443 -
Phco10g01874 336 Coils Coil 144 164 - -
Phco10g01874 336 SUPERFAMILY Clavaminate synthase-like 25 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01874 Phco-Chr10 40925407 40926895 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01874 10 40925407 40926895 Phco10g01874 10 40925407 40926895 ECH
Phco10g01874 10 40925407 40926895 Phco1g00232 1 1632931 1634895 PCT