Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00177 ATGGGTGTGAGCTCCAACAGAGTTGAGGACTTAGCATGCAACAATGGTTGCAGCATGAAGAACCAAAGTGAGATACAAATGGCAATGCCAGTGGCAGCCATGGAAATCCACAAAGTTCAGTTGCCACCAGAACGCACCACCATGCAAAAACTGAGACACAGGCTCTCTGAGATCTTCTTCCCAGATGACCCTCTCCACAGGTTCAAGAACCAAACTTGCCTCATGAAACTTCTCCTTGCTCTCCAATACCTGTTCCCCATTTTCCAATGGGCCCCTCTCTACAACCTTTCCCTTCTCCGCTCTGACATCATCTCCGGTCTCACCATTGCAAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTAGCAAACTTGCCACCCATTATTGGATTATATTCCAGCTTTGTGCCTCCGCTGATATATTCCCTGCTTGGGAGTTCAAGACATATTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGTGAGACGGTTTCTTATACTCAAGATCCTATTCTCTATCTCAAAATGGCTTTCACTGCCACTTTTTTTGCCGGATTGTTCCAATCTTCTCTGGGTATATTAAGGTTAGGCTTTGTAATTGATTTTCTCTCAAAGGCAACGCTGGTGGGTTTCATGGCCGGTGCAGCTATTATTGTGTCACTGCAGCAGCTGAAAGGATTGCTTGGAATAGTTCATTTCACCAACAAGATGCAAATAACGCCTGTGCTCATCTCTGTTTTCAAGAAAAGAGACGAGTGGTCATGGCAAAACCTTCTGCTGGGATTCAGTTTCCTACTATTCCTGTTGACAACAAGGCACATTAGCTTGAAGAAGCCAAAACTATTCTGGGTTTCAGCAGCTGCCCCGTTGACATCAGTCATTCTGTCAACCGTTTTAGTATTTTTTCTGAGAAACAAGGCCCATAAAATTGCTATTATCGGTGAATTGCCAAAAGGGCTTAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTCTCAAAACAGGACTTGTCACTGGGATTTTGTCTCTCACTGAAGGAATTGCAGTGGGAAGAACATTTGCTGCACTGAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGTTCTTGTTCTTCATGCTACGTCACAACAGGGTCATTTTCCCGATCAGCTGTTAACTTCAATGCTGGGGCACAGACAGCAGTATCAAATATAATCATGGCATCGGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCGCTGTTCTATTACACACCGAATGTAGTCTTAGCAGCCATTATCATCACTGCTGTTGTAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGACTTCTTGGCCTGCTTGTGCTCCTTTTTTGGTGTTCTGTTCATTTCAGTGCCTCTAGGCCTTGGAATAGCGGTGGGAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCGGGGACGCCAATATTCCACAACCTAAACCAATATAGAGAAGCTTTGAGGATTCCTTCATTTATCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTGCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGAGTAAAAGCAAACGATGAAAGTGCATTGAAGTGTATAATTTTGGACATGACGGCTGTTACAGCCATAGACACAAGTGGAATCGATACTCTATGTGAACTTAGGAAGGTGCTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAGTTGCATAACTCAAATATTTTAGATTCCTTTGGGTTGAAAGGTGTCTATCTCACAGTTGGAGAAGCTGTGGCTGACATTTCATCCTCCTGGAAAGCTCAGCCTTGA 1986 0.4361 MGVSSNRVEDLACNNGCSMKNQSEIQMAMPVAAMEIHKVQLPPERTTMQKLRHRLSEIFFPDDPLHRFKNQTCLMKLLLALQYLFPIFQWAPLYNLSLLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHIGVGPVSIASLVMGSMLSETVSYTQDPILYLKMAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKKRDEWSWQNLLLGFSFLLFLLTTRHISLKKPKLFWVSAAAPLTSVILSTVLVFFLRNKAHKIAIIGELPKGLNPPSSNMLYFNGPYLALALKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNFNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVVGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVGISVFKILLHVSRPNTLVLGNIPGTPIFHNLNQYREALRIPSFIILAVESPIYFANSTYLQERILRWVREEEERVKANDESALKCIILDMTAVTAIDTSGIDTLCELRKVLDKRSLQLVLANPVGNVMEKLHNSNILDSFGLKGVYLTVGEAVADISSSWKAQP 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00177 661 Pfam STAS domain 531 649 IPR002645 -
Phco1g00177 661 PANTHER SULFATE TRANSPORTER 50 653 IPR001902 GO:0016020|GO:0055085
Phco1g00177 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Phco1g00177 661 Gene3D STAS domain 510 655 IPR036513 -
Phco1g00177 661 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Phco1g00177 661 FunFam Sulfate transporter 31 510 656 - -
Phco1g00177 661 Pfam Sulfate permease family 99 478 IPR011547 GO:0016020
Phco1g00177 661 NCBIfam sulfate permease 86 649 IPR001902 GO:0016020|GO:0055085
Phco1g00177 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Phco1g00177 661 SUPERFAMILY SpoIIaa-like 535 652 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00177 Phco-Chr1 1274582 1278687 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00177 1 1274582 1278687 Phco1g00177 1 1274582 1278687 ECH
Phco10g01931 10 41282568 41286876 Phco1g00177 1 1274582 1278687 PCT