Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01931 ATGGGTGTGAACTCTAACAGAGTGGAACACTTCGATAACCACCACGCCACCCTCAGAATCCAAACCCAGACACCATCATTGGAAATCCATGCAGTGCAATTGCCGCCACAACGAACCACACTCCACAAACTCAGACAGAGAGTCTCCGAAATCTTCTTCCCCGACGACCCTCTCTACCGTTTCAAGAACCAAACCTCCTTCAAAAAGTTCATCCTCGCGCTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCAAACTACAACCTCACCCTTCTCCGCTCTGATATCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGGATCAGTTATGCCAAGCTTGCAAACTTGCCACCCATTATTGGACTATATTCAAGTTTTGTGCCTCCATTGATATACTCGCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGACCTGTTTCGATCGCGTCTTTGGTTATGGGATCAATGTTAAGTGAGAAAGTTTCTTTCACACAAGACCCTACTCTGTATCTTGGATTGGCTTTCACCGCCACTTTCTTTGCTGGTGTGTTCCAAGCTTCTCTGGGTATACTAAGGTTAGGGTTCGTAATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACAGGCGGTGCCGCCATTATCGTGTCACTGCAGCAGCTGAAAGGTTTGCTTGGAATAGTGCACTTTACCAGCAAGATGCAAATAGTTCCTGTCATGATCTCTGTTTTCAACCAAAGACATGAGTGGTCATGGCAAACCATTCTTTTGGGATTCAGCTTCTTGGCATTCTTGATGACCACAAGGCACATTAGCTTGAGGAAACCAAAACTCTTCTGGGTTTCAGCCGCTGCACCATTGACATCAGTTATTCTGTCAACCATTTTAGTCTTTCTTCTGAGAAACAAGACTCATCAAATTTCAATTATTGGACACTTACCGAAGGGAGTTAATCCACCTTCATCAAACATGTTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATTATCACTGGGATCTTATCTCTAACTGAAGGAATTGCAGTAGGTAGAACATTTGCATCACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCTATTGGTCTAATGAATATAGCTGGCTCTTGTTCGTCATGCTATGTCACAACAGGGTCTTTTTCTAGATCAGCTGTTAACTACAATGCCGGAGCACAGACAACAGTTTCGAATATAATCATGGCGGCAGCTGTTCTAGTTACCCTTTTGTTTCTCATGCCTCTGTTCTACTATACACCAAATGTAGTCTTAGCGGCCATTATCATCACTGCTGTGATTGGGCTAATAGATTATCAATCTGCGTATAAATTGTGGAAGGTTGACAAACTTGATTTCTTGGCATGTCTGTGCTCCTTTTTCGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGTATAGCGGTTATCATATCAGTCATCAAGATCCTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACTCAAATATTCCACAGCATAAACCAATACAAAGAAGCGTCAAGAGTTCCTTCATTCCTCATTTTGGCTGTTGAGTCACCAATCTATTTCGCTAACTCAACTTATCTTCAGGAAAGGATACTAAGGTGGGTTCGAGAAGAGGAAGAACATATAAAAGCTAATGATGGAGCTTCATTGAAGTGCATGATTTTAGACATGACAGCCGTCACAGCCATCGACACAAGTGGGCTTGAGACTTTATGTGAACTTAGAAAGATGCTGGAGAAGAGATCACTCCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGGCGGAAAAATTGCACAAGTCAAAAATTTTGGATTCCTTTGGATCAAAAGGAGTCTATCTCTCAGTGGGAGAAGCTGTGGCTGACATTTCATCGATCTGGAAAGCTCAGCCTTGA 1965 0.4356 MGVNSNRVEHFDNHHATLRIQTQTPSLEIHAVQLPPQRTTLHKLRQRVSEIFFPDDPLYRFKNQTSFKKFILALQYLFPIFQWAPNYNLTLLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEKVSFTQDPTLYLGLAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFTSKMQIVPVMISVFNQRHEWSWQTILLGFSFLAFLMTTRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNKTHQISIIGHLPKGVNPPSSNMLYFNGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVIISVIKILLHVTRPNTLVLGNIPGTQIFHSINQYKEASRVPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANDGASLKCMILDMTAVTAIDTSGLETLCELRKMLEKRSLQLVLANPVGNVAEKLHKSKILDSFGSKGVYLSVGEAVADISSIWKAQP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01931 654 FunFam Sulfate transporter 31 503 649 - -
Phco10g01931 654 Pfam Sulfate permease family 92 471 IPR011547 GO:0016020
Phco10g01931 654 Gene3D STAS domain 503 648 IPR036513 -
Phco10g01931 654 PANTHER SULFATE TRANSPORTER 42 645 IPR001902 GO:0016020|GO:0055085
Phco10g01931 654 Pfam STAS domain 524 642 IPR002645 -
Phco10g01931 654 SUPERFAMILY SpoIIaa-like 528 645 IPR036513 -
Phco10g01931 654 ProSiteProfiles STAS domain profile. 523 646 IPR002645 -
Phco10g01931 654 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
Phco10g01931 654 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Phco10g01931 654 NCBIfam sulfate permease 79 642 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01931 Phco-Chr10 41282568 41286876 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01931 10 41282568 41286876 Phco10g01931 10 41282568 41286876 ECH
Phco10g01931 10 41282568 41286876 Phco1g00177 1 1274582 1278687 PCT