Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01985 ATGGAGCCTCACGCCACTTCTTTCGTGTCCAAGGCGCGCATCGCCTTCCATTCCGCTGCAGCCAAAGCGGAGCGAGTTCTGTTGGACTTGAAATCCGATCGAGATTCCGATAAGCAATTTCACGACGAGTTAGGGAGGCGGCGGGGCGATGAATCTGCGCGGAGCGAGCACGAGTCCAAGTTTATCAATGAACTGAAGCATTTAAAGTGGAGACCTCCGCATATAGGAACAAAGCGGGATTGGCAAGACAAAATAAACAACATTAGAAAAGGGAGAAAAGAAGTTGAAGTAACAGATAAAGTTGGCGACATAAACATGGCCTCCGCTCCATTTTATGATGAAAATTCGTACATTCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCTGAATCAATTCCCTCGGTTGAAGGCTTAACTGCTGCGACTGAATACCCCATCCCTCCATCGTCTGTCCTGAAGCAGTTGGCTATAGCTTTTGAGGCTGGAAGGGGAACAAACTCAATGAAAGATTTTGTAGCTTCATCAAGAGGTTCATCACCTGCCAGAGAGAGGTCAGGCTTAAGTCTATCTTCGATGAAGGCTTTAGTGTTGCGTGAAAAGGAGGGCAAACTTACCTCTGAGTTCAGTAGCGATGAGAAAGTTCTGTACTTGATTAATTCATTGTTTGATCCAGAGGGAAAGTTCCTTCGAAGGAAGATCAACTCTGATCCAGAGGAAACTTTCATATCATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCTTAGTTGCTAACCTAGCTGAAGTAATTGGAAACTTAAAGACGCTCCAAGAAATGGCTCTTTTTTGGTGCAGGGTTGTTGCTGAACTTAGAAAACATTGGTCCAAAGAGAAATATTTACCTGGAATCCCCCATGATGACATTCCAGATCTGAAGTATTGTCTTCTCTATCAAAAATTTCAAGTAATTAATTGTTGCATTTCTCGGAAAAGGCGCTATATTATTGCCACTGAATCACTAAACTCTATGATGGTGGAAGCCAATTTAAACACATTAGAACCACCAAAGTACTCAGACAAAATTCCTGCTACCCCTTTATTATATGCAAGGTTAAGAACTGGAGAGCTTGTTCTTAGGCTTGGGGCTGATTGCCCATCTGGAGATTTGATGTTACTAGAAACAGGCGAGCCTGCATTCTCTCCTGTCACCCAGGAGGGACCATTGCTTACAGAAGATGTGATCAAAGAGACAGAGGAGTTTGTGCTACGGACAGGAAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTGAGATGGTATTCTCCCCCTGACTGGACTGAAAGTGAGGGAAGTAGTGAGGATAGAGACTCTTTTTATTGTGGTGAGTCAATGTCTACCAGAGGTCAACTAAGTCTACGAATGAAAAAGGAAGGTAATTTGTGGCGTGAATTATGGGAAACATCTAAACCAGTTCCAGCTGTTAAACAGGCACCTCTCTATGATGAGGATTTGGCAGTGGAGGGTATTCTAGATGCATTTGAGGACATTCCGCCTTCGGAGCTTTTTGAACAGCTGTTTGTTTCTCTTCTGGGTTCAGGATTTGCAATTGCTGAAAATATGCTCTCTGGTGACGTTGACATTTCAAAATCCTTAAATGACTGCAAGGACTACATAGTTACCGCTTGTCAAAGCAACAGATTCAATGAGAAACTCGATGAGCTTGTTCAGATGTATGAAATGGTGGAGAAAATGATGCTGAATCCAGATGAGGCAGTGAAGATAGTAAAGGTCATGGAAGAATCAAGTATGACTACTACTAGTGAACCAAAACGCCGGATGTCTACTGGTGAACCAAAGCAGCGGTTAAAGCAACTTAGCCATATATTTGGTGGCAAAGATAAACCATTGACCAGGTCTGTCTGGAAAGAAGAGGTAAACGATGAAAAAAAGCTGGTTCGACATTCCTTCTCAAGTTTCTTTGACAACAGCAAGTCATCTTTATTTTCAAAAAAGCCTCCTAAGCATGGAAACCTATACCCTGTTGATCAACCTCTCTCTCCGGAAAGTGATTGGACAGTTCTTTAG 2124 0.4294 MEPHATSFVSKARIAFHSAAAKAERVLLDLKSDRDSDKQFHDELGRRRGDESARSEHESKFINELKHLKWRPPHIGTKRDWQDKINNIRKGRKEVEVTDKVGDINMASAPFYDENSYILNVKNDLDAKASESIPSVEGLTAATEYPIPPSSVLKQLAIAFEAGRGTNSMKDFVASSRGSSPARERSGLSLSSMKALVLREKEGKLTSEFSSDEKVLYLINSLFDPEGKFLRRKINSDPEETFISSLPRDIHGAPPESLVANLAEVIGNLKTLQEMALFWCRVVAELRKHWSKEKYLPGIPHDDIPDLKYCLLYQKFQVINCCISRKRRYIIATESLNSMMVEANLNTLEPPKYSDKIPATPLLYARLRTGELVLRLGADCPSGDLMLLETGEPAFSPVTQEGPLLTEDVIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTESEGSSEDRDSFYCGESMSTRGQLSLRMKKEGNLWRELWETSKPVPAVKQAPLYDEDLAVEGILDAFEDIPPSELFEQLFVSLLGSGFAIAENMLSGDVDISKSLNDCKDYIVTACQSNRFNEKLDELVQMYEMVEKMMLNPDEAVKIVKVMEESSMTTTSEPKRRMSTGEPKQRLKQLSHIFGGKDKPLTRSVWKEEVNDEKKLVRHSFSSFFDNSKSSLFSKKPPKHGNLYPVDQPLSPESDWTVL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01985 707 Pfam Rab3 GTPase-activating protein catalytic subunit 375 527 IPR026147 -
Phco11g01985 707 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 87 689 IPR045700 GO:0005096|GO:0043547
Phco11g01985 707 MobiDBLite consensus disorder prediction 684 707 - -
Phco11g01985 707 MobiDBLite consensus disorder prediction 35 57 - -
Phco11g01985 707 MobiDBLite consensus disorder prediction 614 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01985 Phco-Chr11 16187063 16194014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01985 11 16187063 16194014 Phco11g01985 11 16187063 16194014 ECH
Phco11g01985 11 16187063 16194014 Phco3g00247 3 1779106 1787556 PCT