Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01881 ATGGGCACTTGCTTTGAGGCCACAACCCCTCTTTCTCTCAAGCCAAACGCCCCCCAATCCGGTGACCATTCTTTCAATTACATCAAATTCTGCGGACTCACTCTCTCTGATCGCCTCCCATGCATATCCATTTGCAAGAATTGGGAGATGACCTTCTCACGTGTGTGGGACTTGGACACGTGTGTGGAGGGTTGTGTTGGTGTTCTTGAGTTCGAGGCGGTTGATCTTTGGTTGAAAATTCAAGAGGAGGCGAGGTTGGATGTGGATCAAGAACCCATTTTGTCTAGCTACTATTTCAGTTCCATTTTGTCTCACAAATCATTAGAGAGTGCTTTGGCCAACCAACTCTCTGCCAATTTGAGCAGTTTGAATCTTCCAAGCAGCACCCTTTTCGATATTTTCTTGGGTGTTTTGATTGATGATAGTGGAGATGATATCATAAGTGCTGTGAAGGATGATTTGGTTGCTGTTAAAGAGAGGGACCCTGCATCCATTAGTTATGTGCATTGTTTGTTAAATTTCAAAGGGTTTCTTGCATGCCAAGCTCACAGGATTGCTCACAAATTGTGGCTTCAAGGGAGGAAGGTTCTGGCCCTGTTGATTCAGAATAGGGTGTCTGAGGATTTTGCTGTGGATATTCACCCTGGTGCACAAATTGGACGTGGAATTTTGTTGGATCATGCTACTGGGCTTGTGGTGGGGGAGACTGCAGCTATTGGCAACAATGTCTCAATTTTGCATAATGTGACTTTGGGAGGGACTGACAAGTCAAGTGGCGATAGAAACCCAAAAATTGGTGATGGGGTGTTGATAGGTGCAGGGACTTGTATTTTGGGAAATATTAAGATTGGTGATGGGGCTAAGATTGGTGCTGATTCTGTGGTGTTGAAGGATGTTCCACCAAGGACTAATGCAGTTGGAATCCCTGCTAGGTTGGTTGGAGGGAAGGACAACCCAATTAGATTGGATAAGATGCCTAGTTTTACCATGGACCATACTTCATATATCTCTGAGTGGTCTAGAAGCTAA 1029 0.448 MGTCFEATTPLSLKPNAPQSGDHSFNYIKFCGLTLSDRLPCISICKNWEMTFSRVWDLDTCVEGCVGVLEFEAVDLWLKIQEEARLDVDQEPILSSYYFSSILSHKSLESALANQLSANLSSLNLPSSTLFDIFLGVLIDDSGDDIISAVKDDLVAVKERDPASISYVHCLLNFKGFLACQAHRIAHKLWLQGRKVLALLIQNRVSEDFAVDIHPGAQIGRGILLDHATGLVVGETAAIGNNVSILHNVTLGGTDKSSGDRNPKIGDGVLIGAGTCILGNIKIGDGAKIGADSVVLKDVPPRTNAVGIPARLVGGKDNPIRLDKMPSFTMDHTSYISEWSRS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01881 342 SUPERFAMILY Trimeric LpxA-like enzymes 76 314 IPR011004 -
Phco11g01881 342 Gene3D Hexapeptide repeat proteins 212 331 - -
Phco11g01881 342 SMART SATase_N_2_a 76 182 IPR010493 GO:0005737|GO:0006535|GO:0009001
Phco11g01881 342 NCBIfam serine O-acetyltransferase 150 311 IPR005881 GO:0005737|GO:0006535|GO:0009001
Phco11g01881 342 Pfam Serine acetyltransferase, N-terminal 76 182 IPR010493 GO:0005737|GO:0006535|GO:0009001
Phco11g01881 342 CDD LbH_SAT 209 309 IPR045304 -
Phco11g01881 342 Pfam Bacterial transferase hexapeptide (six repeats) 262 296 IPR001451 -
Phco11g01881 342 PANTHER SERINE ACETYLTRANSFERASE 73 341 - -
Phco11g01881 342 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 271 299 IPR018357 GO:0016740
Phco11g01881 342 FunFam Serine acetyltransferase 212 337 - -
Phco11g01881 342 Gene3D serine acetyltransferase, domain 1 68 211 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01881 Phco-Chr11 15123902 15124930 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01881 11 15123902 15124930 Phco11g01881 11 15123902 15124930 ECH
Phco11g01881 11 15123902 15124930 Phco3g01689 3 28661755 28664458 PCT