Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01843 ATGGAAATCATTGAGCAAACTCCACTCTTTGATACAAAAGAGGGCAGAGGAAAACTCATCTATAGGTCCTTTGCAGTTTCATTATCTGTGTGCATATGCTTCATATGGATTTACAGATTTAGCCATATAATAGATTCAAAGGGTGAAGATGGCAAATGGGCATGGCTTGGTATGCTTGGTGCTGAATTGTGGTTTGGCTTTTACTGGGTTCTCACTCAGGCCGTCAGATGGAACCTTGTGTTCAGACAACCCTTCAGAAACAGACTCACTCAGAGATATGAGAAAAAGTTGCCAGGAGTGGACATATTTGTGTGCACAGCAGACCCTGATATTGAGCCACCAATGATGGTGATTAATACAGTGCTATCTGTAATGTCTTATGACTACCCAACTGAGAAATTGAATGTGTATCTCTCTGATGATGCTGGATCTCAAATCACGTTCTATGCTCTATTGGAAGCATCAAACTTTGCAAAACATTGGATTCCATTTAGCAAAAGGTTCAAAGTGGAGCCAAGGTCACCTGCTGCATATTTTAAGAGTATAGTCTCATCAGGTTACTCTAGTGATTCTGATCAAGTCAAAGAGCTCACAACTATCAAGAAATTGTACCACGAAATGGAAAGACACGTTGAAGATGCAACCAAGTTTGGTGAAGTACCCAAAGAAGCACGTCTAACGCATAAGGGATTTTCTCAGTGGGATTCATATTCTTCTCGACGTGACCATGGCACAATTCTTGAAATACTGGTTCATAAAAAGGATCCTGAGAATTCAAAAGATGTAGACGGATTCCTTTTACCAACTCTAGTGTATTTGGCTCGCGAGAAGAGACCCCAATACTTCCACAACTTCAAAGCTGGAGCTATGAATTCATTGTTAAGGGTGTCTTCTAATATTAGTAACGGGAAAATCGTTCTAAATGTAGACTGTGACATGTACTCAAACCATTCACAGTCTGTGAGAGATGCTCTCTGCTTTTTCATGGATGAAGAGAAAGGTCACAAAATTGCTTATGTGCAGTTCCCTCAGATTTTTGAGAATGTCACTAAGAATGATTTATATGGGAGTAGTCTACTATCAATATCTGAGGTGGAGTTCCCTGGTGCAGACGGTTGTGGTGGTCCTTTGTATATAGGAAGTGGCTGCTTTCACAAGAGAGAGTCTCTTTGTGGATTGAAATTCAGTGATGAATATAGGATTGACTGGAATACTAGTGAAGATTATCAGTTTAAAGAAGCAAGCCTGAAGGAACTGGAAGAAGAATCAAAGGCTCTTGCAAGTTGCACCTATGAGGAAAATACACTATGGGGAAAAGAGATGGGTTTAAGGTATGGGTGTCCAGTAGAGGATGTGATAACAGGATTGGCTATTCAGAGCCAAGGATGGAAATCAGTGTACTATAATCCACCAAGGAAGGCTTTCTTAGGGTTAGCTCCAACTACCTTGCCTCAAACACTTGTTCAACACAAGAGATGGTCTGAAGGAGACTTGCAAATTTTGCTCTCTAAATATAGCCCTGCATGGTATGGTTTTGGAAGGATTAGTTTGGCACTCCAAATGGGATATAGTATTTATTGCTTATGGGCACCTAGCTGTTTTGCAGCACTATATTATTCTATCATCCCTTCCTTGTACCTCCTTAAAGGCATTCCCTTGTTTCCAAAGATGTCAAGTCCATGGTTCATACCTTTTGCATATATCATTGTTGGGGAAACCACTTATAGTTTGTTGGAGTTTTTCTTCTGTGGGGGCACATTTCAAGGTTGGTGGAATGACCAACGGATATGGCTGTACAAGAGAACAAGCTCTTACCTATTTGCCAGCATTGACACCATCTTGAAGCTTTTTGGATTCTCAGATTCAACTTTTATAATCACAACTAAGGTTACTGAAGAAGAAGCCTCCAAACGCCATGAGAAGGAAATAATGGAGTTTGGAACCTCCTCTCCAATGCTCACTGTATTAGCAACTCTTGCATTGCTCAATTTGTTATGTTTTTTGAGTGTGTTGAAGGATGCAGTCCTAAGGGAAGGTGGCTTTGAAATTTGTGAGACAATGGCCTTGCAATTTCTATTGTGTGGATTTTTGGTTACCATCAATTTACCTATATACCAAGGACTTTTCTTAAGGAAGGACAATGGAAGATTGCCTGGTTCTGTTGCCATAAAATCAATATTACTAGCACTATGTGTATTCATCTCCTTTAGCTTTGCATGA 2220 0.4018 MEIIEQTPLFDTKEGRGKLIYRSFAVSLSVCICFIWIYRFSHIIDSKGEDGKWAWLGMLGAELWFGFYWVLTQAVRWNLVFRQPFRNRLTQRYEKKLPGVDIFVCTADPDIEPPMMVINTVLSVMSYDYPTEKLNVYLSDDAGSQITFYALLEASNFAKHWIPFSKRFKVEPRSPAAYFKSIVSSGYSSDSDQVKELTTIKKLYHEMERHVEDATKFGEVPKEARLTHKGFSQWDSYSSRRDHGTILEILVHKKDPENSKDVDGFLLPTLVYLAREKRPQYFHNFKAGAMNSLLRVSSNISNGKIVLNVDCDMYSNHSQSVRDALCFFMDEEKGHKIAYVQFPQIFENVTKNDLYGSSLLSISEVEFPGADGCGGPLYIGSGCFHKRESLCGLKFSDEYRIDWNTSEDYQFKEASLKELEEESKALASCTYEENTLWGKEMGLRYGCPVEDVITGLAIQSQGWKSVYYNPPRKAFLGLAPTTLPQTLVQHKRWSEGDLQILLSKYSPAWYGFGRISLALQMGYSIYCLWAPSCFAALYYSIIPSLYLLKGIPLFPKMSSPWFIPFAYIIVGETTYSLLEFFFCGGTFQGWWNDQRIWLYKRTSSYLFASIDTILKLFGFSDSTFIITTKVTEEEASKRHEKEIMEFGTSSPMLTVLATLALLNLLCFLSVLKDAVLREGGFEICETMALQFLLCGFLVTINLPIYQGLFLRKDNGRLPGSVAIKSILLALCVFISFSFA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01843 739 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 727 - -
Phco11g01843 739 FunFam Cellulose synthase isolog 90 186 - -
Phco11g01843 739 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 551 IPR029044 -
Phco11g01843 739 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 243 412 IPR029044 -
Phco11g01843 739 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 177 IPR029044 -
Phco11g01843 739 Pfam Cellulose synthase 419 733 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phco11g01843 739 Pfam Cellulose synthase 100 397 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01843 Phco-Chr11 14788666 14792999 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01843 11 14788666 14792999 Phco11g01843 11 14788666 14792999 ECH
Phco11g01843 11 14788666 14792999 Phco3g00143 3 945735 950214 PCT