Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01838 ATGGGTGCTGGAAATCAAGAGGCTGTCAAGCAGTTGCAGTCCCTGATGGAAAATGTGGATGAGCAGCTAAAGAACACATTCCAGAACATGCACCAAGATTATCCAGCTGAATCATTAATACGGTTTCTCAAAGCAAGGGATTGGAATGTTGCCAAAGCCCATAAAATGTTAATTGATTGTTTGAACTGGAGAGTGGAAAATGAGATTGACAAAGTTTTAACGAAGCCTATTCCTGCGGATTTGTATAGAGCCATACGGGATTCTCAACTCATAGGAATGTCTGGTTACTCAAAGGAGGGTCTACCGGTCATTGCTGTTGGTGTTGGGCTCAGTACATATGATAAAGCTTCTGACAAATACTATATACAATCACACATTCAAATCAATGAATATAGGGATCGAGTGATCTTGCCAACAGCTACGAGGAAGCATGAACGATACATTGGCACTTGTGTGAAAGTCTTGGATATGACTGGTTTAAAGTTTTCAGCTCTGAGCCAATTGAGGTTGTTGACTGCTATATCCACAATAGATGACTTAAACTACCCGGAAAAGACAGACACATACTATATTGTTAATGCACCATATGTATTCTCTGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGGAGGAAAATCCAGGTACTGCAAGGTTGTGGGAAGGAGGAATTACTGAAGGTAATGGACTATGCATCCCTCCCACACTTCTGCAGAAAAGAAGATTCCAAGTCATCCAAACATAATGCATCAGGAAACACTGAAAATTGTTTCTCCTTCAATCATGTTTTCCACCAACAACTCTACAATCATATCAAGCATCAAGCTATCATTATGGAGTCAATCTCACCTCCAATCAGACAAGGGTCCTTCTATGTGGACATTCCAGAGCCAGACCCGGATGATGCCAAAATAGCCAAAACCATAGAGACTGAGTTCCACAAATTGGAGAATCAGAAAAATGGCTTTACCAACTCACGAAATGGTGTTACAGTCAATGGCCATCGAAATACAAGCTATTAA 1032 0.407 MGAGNQEAVKQLQSLMENVDEQLKNTFQNMHQDYPAESLIRFLKARDWNVAKAHKMLIDCLNWRVENEIDKVLTKPIPADLYRAIRDSQLIGMSGYSKEGLPVIAVGVGLSTYDKASDKYYIQSHIQINEYRDRVILPTATRKHERYIGTCVKVLDMTGLKFSALSQLRLLTAISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRRKIQVLQGCGKEELLKVMDYASLPHFCRKEDSKSSKHNASGNTENCFSFNHVFHQQLYNHIKHQAIIMESISPPIRQGSFYVDIPEPDPDDAKIAKTIETEFHKLENQKNGFTNSRNGVTVNGHRNTSY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01838 343 Coils Coil 5 29 - -
Phco11g01838 343 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Phco11g01838 343 MobiDBLite consensus disorder prediction 323 343 - -
Phco11g01838 343 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Phco11g01838 343 SUPERFAMILY CRAL/TRIO domain 80 240 IPR036865 -
Phco11g01838 343 SMART sec14_4 85 246 IPR001251 -
Phco11g01838 343 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Phco11g01838 343 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Phco11g01838 343 CDD SEC14 82 240 IPR001251 -
Phco11g01838 343 Gene3D - 2 278 IPR036865 -
Phco11g01838 343 SUPERFAMILY CRAL/TRIO N-terminal domain 18 75 IPR036273 -
Phco11g01838 343 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01838 Phco-Chr11 14749464 14754338 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01838 11 14749464 14754338 Phco3g00140 3 929407 932552 PCT