Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01271 ATGGCTGGAGAAACATCTTGGATAAGCCACTATGATAACAGACAGAGGGAGAATGGAGTGTTTGATTCATTTTTAGAACTTGGTGAGGAAGGAGACAAAGATGTAACTGCTGTTTCCTTGGATGTCATTTTGCCTGATGACTTGTTGGAACGAATCCTAGCCTATCTACCCATTGCAAGCATTTTTAGAGCCGGTTGTGTGTCTAAGAGATGGCATGAAATTGTTAGTTCAGAGAGGTTTTTATGGAACCTTTCACATGTTCTACCGCAGAAACCATGGTATTTTATGTTTACAAGCTCTGATGAACCAATTGGTTATGCTTTTGATCCTGTTTTTCGTAAATGGTATAGCATTGAACTTCCATGCATTGGAACATCAAATTGGTTCATTGCTTCATCAATTGGCATGGTCTGCTTCATGGACAATGACAGCAGAAGTGAATTATGCATCTGCAACCCAATTACCAAAACCTACAGGAAGCTGGAGGAGCCTCCTGGTTTGAAATTTTCTGATTACAGTGCATTGGCAATCTCAGTGAACAGAGAATCTCACATTTATTCTGTGGCAATTGTAAAATCTAAACAAGTTCCGGAGAACTTTTTCCAGTGGGATATCTCAATTCATGTATACAATTCAGTAAACACAACCTGGGTGACCACTTTAACTGAAGTTTTGATGGGGTGGAGAGGGGGTGATGAGAGTGTTATATGCAATGGGATGCTATACTTTTTAGTTTATTCAACTGGGGGTGGCCAACCAGAAAATCGTCATGCACTAATTGCATATAACATGTCTAACCGTTCTTCTCAAGGTAGCTTGACAAGGAGCTTTATTCCAGTACCTTGTTCTCTAACTTGTGGCCGTCTGATGAATCTGAAGGAGAAACTTGTAATGGTGGGAGGAATTGGCAAACCAGATCGACCTGACATAATAAAAGGAATTGGTATCTGGCTGCTAAATGATAAGAGGTGGGAAGAAATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAGTTCGATGATGTTTTTGCTAGCAGTGGTGCAGATGATCTAATATACATTCAGAGTTATGGAGCTCCGGCGCTTCTCATATTTGACACGAGCCATAAACAATGGAAATGGTCTCAGAAGTGCCCTGTGACAAAACGGTTCCCGCTGCAGCTTTTTACTGGCTTTTGCTTTGAGCCTAGACTTGAAATAGCTCCTTAG 1215 0.4123 MAGETSWISHYDNRQRENGVFDSFLELGEEGDKDVTAVSLDVILPDDLLERILAYLPIASIFRAGCVSKRWHEIVSSERFLWNLSHVLPQKPWYFMFTSSDEPIGYAFDPVFRKWYSIELPCIGTSNWFIASSIGMVCFMDNDSRSELCICNPITKTYRKLEEPPGLKFSDYSALAISVNRESHIYSVAIVKSKQVPENFFQWDISIHVYNSVNTTWVTTLTEVLMGWRGGDESVICNGMLYFLVYSTGGGQPENRHALIAYNMSNRSSQGSLTRSFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKRWEEIARMPHKFFQGFGEFDDVFASSGADDLIYIQSYGAPALLIFDTSHKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01271 404 FunFam F-box/kelch-repeat protein At3g61590 37 84 - -
Phco11g01271 404 FunFam F-box/kelch-repeat protein At3g61590 family 90 388 - -
Phco11g01271 404 Pfam F-box-like 44 83 IPR001810 GO:0005515
Phco11g01271 404 Gene3D - 35 84 - -
Phco11g01271 404 ProSiteProfiles F-box domain profile. 44 84 IPR001810 GO:0005515
Phco11g01271 404 PANTHER F-BOX FAMILY PROTEIN 35 401 IPR045048 -
Phco11g01271 404 SMART fbox_2 44 84 IPR001810 GO:0005515
Phco11g01271 404 SUPERFAMILY Galactose oxidase, central domain 97 382 IPR011043 -
Phco11g01271 404 CDD F-box_AtFBW1-like 44 80 - -
Phco11g01271 404 SUPERFAMILY F-box domain 42 119 IPR036047 GO:0005515
Phco11g01271 404 Gene3D - 89 392 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01271 Phco-Chr11 9546887 9548101 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01271 11 9546887 9548101 Phco1g00659 1 6028361 6029578 PCT