Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01254 ATGAAAGTGGGAGATTCCATGGGAAAGATTAATATTTCTCCATCTCAAGTTGCACTCATACTAGATCACTACCTCTGCGCCAACAACTTATCTCAAACACGAGCCACCTTCCGCATGGAGGCATCCTCCCTCTTTGTCGATTCGCCACTTAGTCAAAAGGTTAGGGTTTCCATGGCTTCGGAGACAAAGATCGTGAATCTGACTGAGGAACCCAAGCTAGCCAGGGAAGGTGTTAAGTCTCCCTCCTATGCTTTTACGACCATCTGCAAGTCCCTCGTCGCCGGTGGAGTCGCCGGAGGAGTATCACGAACGGCAGTTGCTCCACTGGAAAGGTTGAAGATTTTGCTACAGGTTCAGAATCCACACAATATAAAGTACAATGGAACAATTCAAGGTCTTAAATATATATGGAGAACTGAGGGTTTTCGAGGGCTGTTCAAAGGGAATGGTACTAATTGTGCTCGAATTGTCCCGAATTCTGCGGTGAAGTTCTTCAGTTATGAGCAAGCTTCCAAGGGTATACTACAACTGTATCAGAAGCAAACTGGAAACGAGGATGCTCAGCTGACTCCTGTTTTACGTCTTGGGGCTGGAGCTTGTGCGGGAATAATTGCCATGTCTGCAACTTATCCAATGGACATGGTTCGAGGCAGAATAACTGTACAGACAGAGAAGTCCCCTTACCAGTACAGAGGAATGTTTCATGCTCTGTCAACTGTACTCAAGGAAGAAGGTCCACGTGCTTTATATAAGGGTTGGCTTCCTTCAGTCATTGGAGTTATTCCTTATGTGGGTCTCAACTTTGCTGTGTATGAGTCTTTGAAAGATTGGTTAGTTAAATCCAATCCATTTGGTATAGTTCAAGATTCTGAGCTGAGTGTGACAACTCGCCTGGCTTGTGGTGCTGCAGCTGGAACTATGGGACAAACCGTTGCTTACCCTCTTGATGTCATTCGACGAAGAATGCAGATGGTGGGTTGGAACCACGCAGCTTCTGTCATAGCTGGTGATGGAAGAGGAAAGGTGCCGCTTGAATACAGTGGCATGATTGATGCTTTTAGGAAAACTGTTCGGTATGAGGGATTTGGTGCATTATACAAGGGTCTGGTGCCGAATTCTGTAAAGGTGGTCCCATCGATAGCAATTGCGTTTGTAACGTATGAGGTGGTGAAGGACATTTTAGGTGTGGAGATCAGAATATCAGACTGA 1209 0.4574 MKVGDSMGKINISPSQVALILDHYLCANNLSQTRATFRMEASSLFVDSPLSQKVRVSMASETKIVNLTEEPKLAREGVKSPSYAFTTICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILQLYQKQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLKEEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLVKSNPFGIVQDSELSVTTRLACGAAAGTMGQTVAYPLDVIRRRMQMVGWNHAASVIAGDGRGKVPLEYSGMIDAFRKTVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEIRISD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01254 402 Gene3D Mitochondrial carrier domain 84 396 IPR023395 -
Phco11g01254 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 86 173 IPR018108 -
Phco11g01254 402 PANTHER SOLUTE CARRIER FAMILY 25 86 396 - -
Phco11g01254 402 Pfam Mitochondrial carrier protein 88 173 IPR018108 -
Phco11g01254 402 Pfam Mitochondrial carrier protein 189 281 IPR018108 -
Phco11g01254 402 Pfam Mitochondrial carrier protein 291 394 IPR018108 -
Phco11g01254 402 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Phco11g01254 402 PRINTS Mitochondrial carrier protein signature 91 104 IPR002067 GO:0055085
Phco11g01254 402 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Phco11g01254 402 PRINTS Mitochondrial carrier protein signature 104 118 IPR002067 GO:0055085
Phco11g01254 402 PRINTS Mitochondrial carrier protein signature 250 268 IPR002067 GO:0055085
Phco11g01254 402 PRINTS Mitochondrial carrier protein signature 301 323 IPR002067 GO:0055085
Phco11g01254 402 SUPERFAMILY Mitochondrial carrier 88 389 IPR023395 -
Phco11g01254 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 292 393 IPR018108 -
Phco11g01254 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 277 IPR018108 -
Phco11g01254 402 FunFam Mitochondrial substrate carrier 84 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01254 Phco-Chr11 9414741 9422889 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01254 11 9414741 9422889 Phco1g00623 1 5556570 5564934 PCT