Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01228 ATGTCTTCAGCCGGTGTCACTACTCTTAGCGTGGTTCCCTCTGAACCATTGTTGTCACCAAAGGCATTCCCTTTCCCATCACACTTGTCTTTGGAAGATAAATCAATTTTCATATATCTCTCCTTTTCGGGTTCGTTGACTCCAATCCGTGTTATGGAGTGGGATACCATTGCGTCTGTGAAATTCAAAATCCGAAGGTGTAAAAGCCTTCCATTTTTAACAAACAAGCAGAAGTTGGTTTATGCTGGCCGAGAACTCGCGCGGAGTGATTCTCTGCTCAAGGACTATGGAGTAACCGGTGGAAATGTTTTGCATTTGATAATCAAACTGTCAGATCTTCAGGTCATCAATGTGAAAACTTCTTGCGGGAAGGAGTTCACGTTTCAGGTTGAAAGAGGTCGGGATGTTAGGTACATAAAGCGGCGGATTGCCAAAAGAGTAAAACAGTTTGATGATCCTGAGGAGCAGGAAATTGTGTGCAATGGGGAAAGGCTTGATGACCAGAGGCTTATCGATGATATCTGCTGCAAGCATAATGATGCTGTGGTACGTCTGTTTGTGAGAAACAAGGATGTCAAAGTTCAGAGGAGACCCCTTGAGTTGTCCATTTTAGCAACAGATTTGATTGATGAGAAAAGAAACGTTGTCAATGGAGAGACGTCTAGGAGGAATTATGATGTTGGTAAAGAAGATACTATTAGAAAGTCTGATGCCATTCAAAGAACTGTGCCGAGAAAGCCTCCCGACAGAGATTTTATTTTGGAGCCAGTTATTATTAACCCTAAAATTGAATTAGCTCCAGCTATTTGGAATATGGTGAATTCTACATATGATGGAGTTGACAATGGAAAATATCCAATCAGATCTGCAGAGGGTACAGGAGGAGCTTACTTTATGCTTGATTCAGCGGGGCAAAAGTATGTGTCTGTTTTTAAGCCTATTGACGAAGAACCAATGGCCGTGAATAACCCTCGAGGTCTTCCGTTGTCGTTAGATGGTGAAGGCTTAAAAAAAGGTACAAGAGTTGGTCAAGGTGCATTCAGGGAAGTTGCAGCCTATGTTTTAGATCATCCATTGAGTGGGCGCCGCAAATTATTTGGTGATGAGACGGGCTATGCTGGTGTCCCTCCAACATTGATGATCAAGTGCTTGCATAAAGCATTTAACTATCCTAGAGAATTGACTCCTAAGATTGGCTCCTTGCAAATGTTTACAGAAAATAGTGGAAGTTGTGAAGATATGGGCCCTGGGGCTTTCCCAGTAAAGGAAGTACATAAAATTTCTGTTTTGGACATAAGACTGGCGAATGCTGATAGGCATGCTGGGAATATTTTGATCAGCAAAGAGGAAGACAACAACCAGTCTGTTCTGATTCCAATTGATCATGGATACTGCTTGCCTACAAGCTTTGAAGATTGTACCTTTGAGTGGCTTTACTGGCCCCAAGCTTGCCAGTCATACTCCCCAGAAACTATTGAGTACATAAAGTCACTGGATGCTGAAGAAGATATTGCCCTTTTAAAGTTTCACGGGTGGGATCTGCCGGTTGAATGTGCTCGCACTCTCAGGATCTCTACCGTGCTTTTGAAGAAAGGGGTAGAGAGAGGGTTGACCCCCTTTGCCATTGGAAGCATGATGTGCAGGGAATCCTTGAACAAGGAATCTGCTATTGAAGAAATAGTACAAGCTGCACTGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTTCTGGATGCTGTTTCCCAAATCATGGATCTGCGCCTCGATGAGATTGTCAGATCTCGTTTATAA 1794 0.4303 MSSAGVTTLSVVPSEPLLSPKAFPFPSHLSLEDKSIFIYLSFSGSLTPIRVMEWDTIASVKFKIRRCKSLPFLTNKQKLVYAGRELARSDSLLKDYGVTGGNVLHLIIKLSDLQVINVKTSCGKEFTFQVERGRDVRYIKRRIAKRVKQFDDPEEQEIVCNGERLDDQRLIDDICCKHNDAVVRLFVRNKDVKVQRRPLELSILATDLIDEKRNVVNGETSRRNYDVGKEDTIRKSDAIQRTVPRKPPDRDFILEPVIINPKIELAPAIWNMVNSTYDGVDNGKYPIRSAEGTGGAYFMLDSAGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYVLDHPLSGRRKLFGDETGYAGVPPTLMIKCLHKAFNYPRELTPKIGSLQMFTENSGSCEDMGPGAFPVKEVHKISVLDIRLANADRHAGNILISKEEDNNQSVLIPIDHGYCLPTSFEDCTFEWLYWPQACQSYSPETIEYIKSLDAEEDIALLKFHGWDLPVECARTLRISTVLLKKGVERGLTPFAIGSMMCRESLNKESAIEEIVQAALDSVLPGTSEATFLDAVSQIMDLRLDEIVRSRL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01228 597 ProSiteProfiles Ubiquitin domain profile. 116 173 IPR000626 GO:0005515
Phco11g01228 597 SUPERFAMILY Ubiquitin-like 42 112 IPR029071 -
Phco11g01228 597 Gene3D - 115 200 - -
Phco11g01228 597 ProSiteProfiles Ubiquitin domain profile. 34 109 IPR000626 GO:0005515
Phco11g01228 597 Gene3D - 35 109 - -
Phco11g01228 597 SUPERFAMILY Ubiquitin-like 110 183 IPR029071 -
Phco11g01228 597 CDD Ubl_ubiquitin_like 116 186 - -
Phco11g01228 597 Pfam Ubiquitin family 38 110 IPR000626 GO:0005515
Phco11g01228 597 Pfam Ubiquitin family 116 188 IPR000626 GO:0005515
Phco11g01228 597 SUPERFAMILY Protein kinase-like (PK-like) 428 592 IPR011009 -
Phco11g01228 597 Pfam Phosphatidylinositol 3- and 4-kinase 292 541 IPR000403 -
Phco11g01228 597 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 283 576 IPR000403 -
Phco11g01228 597 SMART ubq_7 114 188 IPR000626 GO:0005515
Phco11g01228 597 SMART ubq_7 36 109 IPR000626 GO:0005515
Phco11g01228 597 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 46 565 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01228 Phco-Chr11 9216426 9218357 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01228 11 9216426 9218357 Phco1g00587 1 5105821 5108256 PCT