Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01204 ATGAGCGTGGTTGCCATGGTTCTTCTCACTCCCGTATTTCTGTTAACCCTCGCCGCCGCCGCCTTGCTTATAGCGGTGATTGGGGCGAAGGTGATCCAAACGGGGTGCGGCAAGAGGGTATGGAGAAGAATGGAAGATTGGTTCCACGTGTATCAGTTCCTCACAGTACCTGAACTCAACCAAACCAAACACCAAAACCACCTCTACACAAACCTCTCCCTATACTTACATTCACTACCTTCCATCCAAGACTCCCACTTCGCCAACCTCGTAACTGGGAAGAACCAAAACGACATCGTCCTCTGCCTCGCCCCCAACCGAACCATCCAGGACCATTTTCTCGGAGCCACAATCTACTGGTTCAACCAACCCACTCATACCAACCCAGAAGGAACCGGAGCCGGAACCGGAACCTACGTTCTCAAGATCAGGAAGGTGGACAAGCGCCGAATCCTCCGTCCTTATCTTCAGCACATTCACGCCGTAGCCCACGAAATCGAGCTGCAAGGAAAGCGCGACTTGCGCCTCTTCACCAACAGCGCCGATGAGTTTGGTCAGTGGAGATCCGTTCCGTTTACGCATCCTTCCACGTTCGACACCATCGCCATGGAACCGGATCTCAAAAACAAGGTCAAATCCGATCTTGAATCCTTCCTTAGAGCGAAACAGTACTACCACCGAAACGGCCGCGTCTGGAAACGGAGCTTCCTCCTCTACGGTCCATCCGGCACCGGAAAGTCGAGCTTCGTCGCCGCCATGGCGAATTTCCTCTCCTACGACGTGTTCGACATCGACCTGAATAAAATCCCTAGTGATTCGGAGCTGAAATTGCTCCTCCTGCATACGACGCCGAAATCGGTGGTGGTAATCGAGGACCTGGACCGGTTTGTGGCGGATAAAACCGCGAGAATAAGCGTTTCGGGCATACTGAACTTCATGGACGGTCTTATAACCTCGTGTTGCGCGGAAGAGAGGGTGATGGTGTTCACGATGAACACGAAGGAGCATGTTGACCCGAACCTGCTTCGTCCGGGTCGGATCGATGTGCATATCCATTTTCCTCTGTGTGATTTTTCGGCCTTTAAGACGCTGGCGAATAGTTACCTTGGGGTGAAGGAGCATAAGCTGTTCCCTCAGGTGCAGGAGATTTTCCAAAACGGTGCGAGTTTGAGTCCCGCTGAAATCGGTGAGTTGATGATCGCGAACCGGAACTCGCCCAGTCGGGCTATTAGATCAGTCATCACCGCATTGCAAACGGACGGTGATGGCAGGGGGTGCGGCTTGATGGGACGGCAGAAGGAGGATGATGAAATGGATGAACCTGATGGGGTTGTCTGCGGTGAGGGTGTCCATACGGTTAAGGATTTGCGGAGACTGTACAGTTTTTTCAGATTCAGGGTTACAAGAAAATCTTCGTCCTCCAATTCTTCCTTGCCCGCGAGTCCATTGCGATAG 1455 0.5258 MSVVAMVLLTPVFLLTLAAAALLIAVIGAKVIQTGCGKRVWRRMEDWFHVYQFLTVPELNQTKHQNHLYTNLSLYLHSLPSIQDSHFANLVTGKNQNDIVLCLAPNRTIQDHFLGATIYWFNQPTHTNPEGTGAGTGTYVLKIRKVDKRRILRPYLQHIHAVAHEIELQGKRDLRLFTNSADEFGQWRSVPFTHPSTFDTIAMEPDLKNKVKSDLESFLRAKQYYHRNGRVWKRSFLLYGPSGTGKSSFVAAMANFLSYDVFDIDLNKIPSDSELKLLLLHTTPKSVVVIEDLDRFVADKTARISVSGILNFMDGLITSCCAEERVMVFTMNTKEHVDPNLLRPGRIDVHIHFPLCDFSAFKTLANSYLGVKEHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIRSVITALQTDGDGRGCGLMGRQKEDDEMDEPDGVVCGEGVHTVKDLRRLYSFFRFRVTRKSSSSNSSLPASPLR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01204 484 Gene3D - 188 355 IPR027417 -
Phco11g01204 484 PANTHER BCS1 AAA-TYPE ATPASE 45 429 - -
Phco11g01204 484 Pfam Domain associated at C-terminal with AAA 41 120 IPR025753 -
Phco11g01204 484 SMART AAA_5 232 357 IPR003593 GO:0016887
Phco11g01204 484 Pfam ATPase family associated with various cellular activities (AAA) 237 355 IPR003959 GO:0005524|GO:0016887
Phco11g01204 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01204 Phco-Chr11 9015296 9016750 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01204 11 9015296 9016750 Phco1g00566 1 4822662 4824092 PCT