Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00408 ATGAGCGCCCTCAGTGCCCCGTTTGCAAGGCTGTTATATCCAACAGCACAATGGTTCCACTCTACGCCCGTGGCCATGCCACAGCTGAAGGGAAAACATCTTCTTGTGATACCTCCAAGACCACCTGCTTTATGTGCTCAAGATCTTGTGGTAACATCATCTCGAGGGGGTCAGCACCTTCCATATTGTAATCCTTACCAGGGTCACTACTTCAGCTCTCGTCCATATCAAGAAGAGGACGCCACTTCACGAATGCTGAATCTTGGATCGTACCACCATCCTGTGACTGGGATGTTTGGGGAGATGGTTTATTCCAGAGTGTTTGGCAACCCAGAAAATTTTTGGGCCCATCATCAGAATTGGGCCCCTGATCAGAATTGGGTCCCTTGGGAGAAGGAGAAGGTCATTAGACATTTCGATAGCTGCAAGGCTGACCTGGTTGTGTGTGATGGTGTTCCTGATGTTACTGGGCTTCATGACATGGATGAGTTTGTACAGTTCCAACTCATACTTGCAGTAAGAGTGCGGAGTTCGTCCGTCTTCTTTGAACCAGTCGAGCAGTGGTGGCGATCAGCGGAGCAGGTTGCGCTGGTGGCAATTGTGGAAAGAAGGTTGCACGGTGGTCGCGAATCATCATACAACCTGCGTCGTCTCTGCTTTGCAGCTAAAGTTATTCTTCCCACATTTGCAAAACCAAAAAGCAGCCATAATTCTAGCATAGAGGCATTTGCAGTCTGTGAAAACTATTCCCCTCCTGAAGGATTCAATCCAAAAGATCTGCATCGCCTTCTTGAGAAGGATGTTGCTTTTAAAGCAGCATATTTCAACAAAACAAAGGCAACTAGACAAGATAAACAAGGTGTCAGTAGCAAGCACTTGTTTGGTCAATTCTTTTGTGGTCTTTCTCAGAGGGAAATGCACATCGCACTTGACCCATGCCAGTGCAGGGGAGCATTCGAACTTTTAGCATGA 972 0.4733 MSALSAPFARLLYPTAQWFHSTPVAMPQLKGKHLLVIPPRPPALCAQDLVVTSSRGGQHLPYCNPYQGHYFSSRPYQEEDATSRMLNLGSYHHPVTGMFGEMVYSRVFGNPENFWAHHQNWAPDQNWVPWEKEKVIRHFDSCKADLVVCDGVPDVTGLHDMDEFVQFQLILAVRVRSSSVFFEPVEQWWRSAEQVALVAIVERRLHGGRESSYNLRRLCFAAKVILPTFAKPKSSHNSSIEAFAVCENYSPPEGFNPKDLHRLLEKDVAFKAAYFNKTKATRQDKQGVSSKHLFGQFFCGLSQREMHIALDPCQCRGAFELLA 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00408 323 Gene3D Vaccinia Virus protein VP39 110 255 IPR029063 -
Phco11g00408 323 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 132 252 - -
Phco11g00408 323 Pfam FtsJ-like methyltransferase 132 249 IPR002877 GO:0008168|GO:0032259
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco11g00408 Phco-Chr11 2644824 2652759 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00408 11 2644824 2652759 Phco11g00408 11 2644824 2652759 ECH
Phco4g02611 4 47434295 47435017 Phco11g00408 11 2644824 2652759 PCT