Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02046 ATGTCAGGAGAAGAGGTAGCTGTTCCAGCTGAGGCACCTGCTTCCATTCCCGGTGAGCCCATGGACATCATGACTGCTTTACAGCTTGTGCTGAGAAAATCTCTGGCTTACGGTGGTCTTGCAAGAGGTCTTCATGAAAGTGCTAAGATCATTGAGAAGCATACTGCACAGCTCTGCGTTCTAGCAGAAGATTGTGACCAACCTGATTATGTGAAACTGGTGAAAGCCCTTTGCGCAGAGCACAATGTTAGCCTTTTGACAGTTCCAAGTGCAAAGACCCTTGGAGAATGGGCTGGTTTGTGTAAGATTGATTCAGAGGGAAAGGCTAGGAAGGTAACAGGTTGCTCATGTGTGGTTGTTAAGGATTTTGGGGAGGAACACGAAGCCTATAATGTTGTTCTTCAGCACGTTAAAGCTAACTGA 423 0.4657 MSGEEVAVPAEAPASIPGEPMDIMTALQLVLRKSLAYGGLARGLHESAKIIEKHTAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKAN 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02046 140 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 26 119 IPR004038 -
Phco10g02046 140 SUPERFAMILY L30e-like 20 138 IPR029064 -
Phco10g02046 140 FunFam 40S ribosomal protein S12 7 140 - -
Phco10g02046 140 ProSitePatterns Ribosomal protein S12e signature. 26 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
Phco10g02046 140 Gene3D - 7 140 IPR029064 -
Phco10g02046 140 PRINTS Ribosomal protein S12E family signature 85 106 IPR000530 GO:0003735|GO:0005840|GO:0006412
Phco10g02046 140 PRINTS Ribosomal protein S12E family signature 30 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
Phco10g02046 140 PRINTS Ribosomal protein S12E family signature 110 123 IPR000530 GO:0003735|GO:0005840|GO:0006412
Phco10g02046 140 PRINTS Ribosomal protein S12E family signature 44 60 IPR000530 GO:0003735|GO:0005840|GO:0006412
Phco10g02046 140 PANTHER 40S RIBOSOMAL PROTEIN S12 16 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02046 Phco-Chr10 42085446 42086925 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g02046 10 42085446 42086925 Phco1g00068 1 505710 507444 PCT