Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01958 ATGAAGAAGCAGTGCTGTGAAGAATCTGAGGCAACTGTTGGATCCTGGGAATGTTGGTTCGATGATGCATGCATCGTTGACATGGATTACTTTGTGAAGACCCTTTCAAGCATCAAACAGAAGGGTATTCGTGCTGACTTGATTGGTTCCATCATCACTCATTATGCGTCCATTTGGCTCCCTGACCTCTCTGCCTCTTCTCAGAATGCTGTCACCACTCAATTCCAATCCCCCGAAAGCGTCACGAATTCATGGATGAAGAAGAGATTCTTTGTGGAGACCTTGGTCAATGTTCTTCCTCCTGAGAAGGATTCTGTGCCATGCAACTTCCTCCTTCGCCTTCTCAGAATCGCCATCATGGTTCGGGTTGATGCTACTTATATAGCTGAGATTGAAAACCGCATTTCCTCGCAGCTAGATCAAGCTTCTCTCAAAGAGCTCATGATACCCTCCTTCAGCCACACGTGTGGAACTCTCTTGGATGTTGAGCTTGTCCTCAGGTTGGTTAAGACGTTTTTGAGTATGGACCGCGATGGTGCTGCTTTGGTTAAGGTGGCCAAGTTGGTTGATTGCTACCTGGCTGAGGCTGCTGTGGATGCCAGTTTGTCCTTGTCTGAATTCCGTGCACTTGCTGGAGTTCTTCCAAGCCACGCAAGAGCCACGGATGATGGCTTGTACAGAGCCATTGACACTTATCTAAAAGCACATCAAGGTGTGTCAAAGCAAGAAAGGAAGGGCCTGTGCAGATTTCTTGATAGCAGGAAACTCACACCAGAGGCCTCACTTCATGCAGCTCAAAATGAAAGGTTGCCTGTGAGAGCTGTGATTCAGGTGCTGTTCTCTGAACAAGCCAAACTCAACCGCCAAGTAGATTGGAGTGGCTCCTTCAGCTTGAGGAGCCCAAATGGAGGCCTTGACCCACTGGGACGGTGCCTTTCAAAGCGAGAAATGAATGCTCAGCAGTTGGAGATAAGGAAGTTGAAGGAAGATGTTAACAGGCTGCAAAACCAGCTGAATGCCATGAAAGTGCAGATGGAGAGGTTGGCTGAGAAGAAGAAGGGCTTATTCAAATGGAAGAAGCTTGGAATGCCTACATGGGGTAGAAATGTGGGAGGGGTGGAGAGAATGGAAGAAGAGGAGGAGGAAGATGAAAGAGAAGTTGGGTTTCGAAGGAAAACGCCTATGGACATGAAAACTAGTTTGGTCAAAAGTAGGACTCTCCACAAGTGGAGGAATTCTATGTCCTGA 1248 0.476 MKKQCCEESEATVGSWECWFDDACIVDMDYFVKTLSSIKQKGIRADLIGSIITHYASIWLPDLSASSQNAVTTQFQSPESVTNSWMKKRFFVETLVNVLPPEKDSVPCNFLLRLLRIAIMVRVDATYIAEIENRISSQLDQASLKELMIPSFSHTCGTLLDVELVLRLVKTFLSMDRDGAALVKVAKLVDCYLAEAAVDASLSLSEFRALAGVLPSHARATDDGLYRAIDTYLKAHQGVSKQERKGLCRFLDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQAKLNRQVDWSGSFSLRSPNGGLDPLGRCLSKREMNAQQLEIRKLKEDVNRLQNQLNAMKVQMERLAEKKKGLFKWKKLGMPTWGRNVGGVERMEEEEEEDEREVGFRRKTPMDMKTSLVKSRTLHKWRNSMS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01958 415 PANTHER OS12G0117600 PROTEIN 16 377 IPR043454 -
Phco10g01958 415 Pfam NPH3 family 18 261 IPR027356 -
Phco10g01958 415 Coils Coil 317 351 - -
Phco10g01958 415 ProSiteProfiles NPH3 domain profile. 17 285 IPR027356 -
Phco10g01958 415 MobiDBLite consensus disorder prediction 374 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01958 Phco-Chr10 41524232 41526435 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01958 10 41524232 41526435 Phco10g01958 10 41524232 41526435 ECH
Phco10g01958 10 41524232 41526435 Phco1g00157 1 1101228 1104675 PCT