Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco10g01875 | ATGGAAACCAAGGCACCCATAGTAGCCAAGAAAGTATGGGACATGGCACGTGTCATGTTCTTCATGATGAGAAAAGGCATATTCAAGGGCAAACTCATGATGGACCTCAATGTCATGCTAAAGCGCCGCAGCAAGCTCGCCGGAAAAGCCATTGCAAACCTAATGTCCCACCACCACCACCACCACGCCGGCTCCCACGACTCGCACGTTCAATTCTCGGCCCCCAGGGAGTACGAGTTCAGCTGCAGCAACACGCCCAACGCCTTCTCCTTCCCAGCAATCGGCAAGCGCCACCGCCACTTCTTCGCCTGTGTCCACGCGCCCCCCACGCAGGACGACGACGCCGTGACGGTCAACGCGGTAAAGGCGGTGTTGGAGATGCTGAACAACGACGTTAAGGTTGAGACGACCTCGTCCCCCGCGCTGCCAGGGTTCGGGCGGAGCCCCATGGTGAGGCAACTGAGGGTGACGGACTCCCCGTTCCCTCTGCGAGATTCCGACCAAGACAACGACCACCAGGTCGATAAGGCGGCGGAAGAGTTCATTAAGAGGTTTTACAAGGAGTTGAAGAAACAGGATTAA | 582 | 0.5704 | METKAPIVAKKVWDMARVMFFMMRKGIFKGKLMMDLNVMLKRRSKLAGKAIANLMSHHHHHHAGSHDSHVQFSAPREYEFSCSNTPNAFSFPAIGKRHRHFFACVHAPPTQDDDAVTVNAVKAVLEMLNNDVKVETTSSPALPGFGRSPMVRQLRVTDSPFPLRDSDQDNDHQVDKAAEEFIKRFYKELKKQD | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco10g01875 | 193 | Pfam | Cotton fibre expressed protein | 172 | 192 | IPR008480 | - | |
| Phco10g01875 | 193 | PANTHER | AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED | 5 | 192 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco10g01875 | Phco-Chr10 | 40936970 | 40937551 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco1g00227 | 1 | 1599646 | 1600224 | Phco10g01875 | 10 | 40936970 | 40937551 | ECH | |
| Phco4g03512 | 4 | 55204363 | 55204962 | Phco10g01875 | 10 | 40936970 | 40937551 | ECH | |
| Phco5g00099 | 5 | 737003 | 737575 | Phco10g01875 | 10 | 40936970 | 40937551 | ECH | |
| Phco10g01875 | 10 | 40936970 | 40937551 | Phco10g01875 | 10 | 40936970 | 40937551 | ECH | |
| Phco10g01875 | 10 | 40936970 | 40937551 | Phco1g00227 | 1 | 1599646 | 1600224 | PCT |