Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01862 ATGGGCAAAGCTACTAGATGGTTGAAGGGGTTGCTGGGAATAAAGAAAGAGAGAGACTACTGTGGCTATTCGAGCTCACTGGCTCCTGACAAGAGGGAAAAGAAACAATCGGAGAAGGATGGAGAGAGTCACATTACACCATCCACCCTTGATCATACAAGACACAGATTCTATGTTGCCAAAAAAGAGGGTGTGAAGAAGAAACAGGCCACTGATGTGGCAGTTGAGAGATCAAGAAGGTGTGGCAGAGACACCTTGCTAATTGGAAGCAAGGAGGGCTGGGCTGCTGTGTCAATTCAATCCTTTTTCAGAGGTTATTTGGCACGAAAAGCTCTCAGAGCACTCAAAGGATTGATTAAGATACAGGCTCTTGTTAGAGGGTATCTAGTTAGAAAAAGGGTTGCTGCAACTCTTCACAGTGTTCAAGCAATGATAAGAGCTCAAGCTGTTGCTCGATCAGTTCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCAGAGTCTCCTTCCAGAAAATATGTGCAACAGTTTGATGAAACAAGAAATTATCAATGTGGCAATAGAAGGGCATCCATATACTCTAAGGAGCCCTTGAATGGATTTGATGAGAGCTCAAAAGTTGTTGAGGTTGACACTCGCATGGCCCATTCAAGATGCAGGAGCATTAACACTGCAATGTCTGAATGTGGAGAGTATCAAGCAATGTCATCCTCTCTTCCATGCCCAGTTCAAGGTCGAATCTCACTTCATCAAAAACAGCACCCTCAAGAGTTTGAATGGTTCTTCAATCTTGATGAAGACAAGAAGTTCTCCACAGCACACAACACGCCTCGTTTACCAAAATGTATGATACCAGCTACTCCACTGAAGAGTGTTTGTGGGGATACCTTTAGGCCTTGCTCCAATTTTCCCAACTACATGGCCAATACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACTAAGAAAAAGGCTTTCAATCAATGAAATTATGGCAGCCAGAAATAGTGTTAGTGGTGTTGGAAAACAGTGGTCATCCAACCCAAAAACTCAAGATTACTGCTTCTTTGACAAGGTTATGTAG 1113 0.4349 MGKATRWLKGLLGIKKERDYCGYSSSLAPDKREKKQSEKDGESHITPSTLDHTRHRFYVAKKEGVKKKQATDVAVERSRRCGRDTLLIGSKEGWAAVSIQSFFRGYLARKALRALKGLIKIQALVRGYLVRKRVAATLHSVQAMIRAQAVARSVRARRSMDKENRFHPESPSRKYVQQFDETRNYQCGNRRASIYSKEPLNGFDESSKVVEVDTRMAHSRCRSINTAMSECGEYQAMSSSLPCPVQGRISLHQKQHPQEFEWFFNLDEDKKFSTAHNTPRLPKCMIPATPLKSVCGDTFRPCSNFPNYMANTHSSKAKLRSHSAPKQRPELRKRLSINEIMAARNSVSGVGKQWSSNPKTQDYCFFDKVM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01862 370 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Phco10g01862 370 MobiDBLite consensus disorder prediction 24 48 - -
Phco10g01862 370 SMART iq_5 114 135 IPR000048 GO:0005515
Phco10g01862 370 SMART iq_5 91 113 IPR000048 GO:0005515
Phco10g01862 370 ProSiteProfiles IQ motif profile. 95 120 IPR000048 GO:0005515
Phco10g01862 370 PANTHER IQ-DOMAIN 5-RELATED 1 343 - -
Phco10g01862 370 Pfam Protein of unknown function (DUF4005) 270 348 IPR025064 -
Phco10g01862 370 Gene3D - 118 166 - -
Phco10g01862 370 Gene3D - 52 117 - -
Phco10g01862 370 Pfam IQ calmodulin-binding motif 119 133 IPR000048 GO:0005515
Phco10g01862 370 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Phco10g01862 370 MobiDBLite consensus disorder prediction 28 48 - -
Phco10g01862 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 135 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01862 Phco-Chr10 40802946 40804393 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01862 10 40802946 40804393 Phco10g01862 10 40802946 40804393 ECH
Phco10g01862 10 40802946 40804393 Phco1g00246 1 1738911 1740679 PCT