Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01794 ATGGGTGCTTCAGGAAAGTGGTTCAAGTCACTCATTCCTTTTCGAAAGACCTCAACTTCAACAACTGATCAAGAGAAGGGTGGTGAAAACAAGAGCAAGAAGAAATGGAAGCTATGGAGAGCTTCTTCAGAAGGGTCCAACGTGAAGAAAGTTGGTGATGCTGCTGTACCTGATTCTTCCTTTACTTATGCGGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAAGCTGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTAAGGCTGCAAGCTATTTTTCGAGGCCGGCTAGTCAGAAAGCAAGCAGCTGTCACTCTGAGATGTATGCAGGCTCTTCTTAGAGTTCAGGCGCATGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCAGTGCAGAAATTACTTGATGAATATCGCAACCTAGCTGATCCTTCTAAGCAAATTGAGCAAGGATGGTGTGATATTCCTGGAACCATGGATGAAGTTAAAGCAAAGCTACGAATGAGGCAAGAAGGAGCTGTGAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGTCAAGACTGGTTGCCAGTCCAAATCCTAAAGCCACTAAGGCGTTGACTCCTCTCAAGCATCACAATCTAAACAATAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGAGGCCAAGCCTTGGGAGAGTCCAATCTACAAGAAGAGTGAAGACCTTGTTCCTGTTTTTCAATCAAGAAAGAATGGTGTGACATCCAGGATTTCAGCAGTTAAACCTCCAATAACCAGCCAATCCACTTCATCATCTTCGGCCATAAGCTCTGAATGCATGTGTGATGATAGCCCTTTGTCAACTTCTTATACAGCTGGATCTCCATCTTTTCCATCCACCAATACTGTTTTAATGGAAGCAACAGAGGAAAGAGATGTTCATCAACCAAGCTACATGAATTTGACAGAATCAACCAGGGCTAAACTGAAAACTTGCAGGAGTTCTTCACATAATTCAAAGAGTCTTGTAATGGAGGAGTGTGTGCCTCACAGCACAACCTCAGGTTTGATGAATGGAGATTCTAGAAGCAGTTCTAATTCTGACCCTTCAGTTAACTTATGGAAGGATTCTTGTGCAACCCCTCTGAGGGCAAGTTATCAAAAACGACAAATTGGGGACAACAATATGTTGCAGCCTGTAACATTGTCAGTTGCAGGCTTGGTTGCTGGGCTTCAATTGGGATCCGTTCTCATCTGA 1311 0.45 MGASGKWFKSLIPFRKTSTSTTDQEKGGENKSKKKWKLWRASSEGSNVKKVGDAAVPDSSFTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALLRVQAHVRARNVRNSPEGKAVQKLLDEYRNLADPSKQIEQGWCDIPGTMDEVKAKLRMRQEGAVKRDRAMAYSLSTQSRLVASPNPKATKALTPLKHHNLNNKSLGCSLLERWMEAKPWESPIYKKSEDLVPVFQSRKNGVTSRISAVKPPITSQSTSSSSAISSECMCDDSPLSTSYTAGSPSFPSTNTVLMEATEERDVHQPSYMNLTESTRAKLKTCRSSSHNSKSLVMEECVPHSTTSGLMNGDSRSSSNSDPSVNLWKDSCATPLRASYQKRQIGDNNMLQPVTLSVAGLVAGLQLGSVLI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01794 436 MobiDBLite consensus disorder prediction 17 37 - -
Phco10g01794 436 ProSiteProfiles IQ motif profile. 102 129 IPR000048 GO:0005515
Phco10g01794 436 MobiDBLite consensus disorder prediction 369 390 - -
Phco10g01794 436 ProSiteProfiles IQ motif profile. 78 106 IPR000048 GO:0005515
Phco10g01794 436 Gene3D - 75 130 - -
Phco10g01794 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 120 IPR027417 -
Phco10g01794 436 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Phco10g01794 436 Pfam IQ calmodulin-binding motif 102 119 IPR000048 GO:0005515
Phco10g01794 436 Pfam IQ calmodulin-binding motif 80 99 IPR000048 GO:0005515
Phco10g01794 436 SMART iq_5 77 99 IPR000048 GO:0005515
Phco10g01794 436 SMART iq_5 100 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01794 Phco-Chr10 40336282 40339100 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01794 10 40336282 40339100 Phco1g00319 1 2361139 2367822 PCT