Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01732 ATGTCGGTCGTTTCTGTGTTTGGTTTGGGCCGAATCCATGTCTCCCTTTCAGCCAAAACCACTCAATCTTTTTCCTCAAAACCTCATCCAGTGTCTCAACTTGGAGCTTCTGTGACCAGCAAAGGAACCAGAAAAAGATTGCAGCTTCAACACGTTCCCGAAATTGAAACGGAAAACCATCAGAAAGAGATCCCAGGATTTGCAAATGAATTGGTTCCAAGAGGTGAAGCCCCTGAGAATTGGGAAAAGGTTCTTCAAGGGATTCGCCAAATGAGGAGTTCGGCAGATGAACATGAACCAGTTGCACGCGAGGAAGCTGCTGATAATAGTGAAAGAAGATTTGCTGTCCTGGCATCTTCCCTTTTATCAAGCCAAACTAAGGAGCATGTTACTCGTGGAGCGACTCAACGTCTTCGTGAAAATGGCCTTCTTACCGCTGAAGCAATGAACAAAGCTGATGAAGAAACAATCAAAAATTTGATTTACCCTGTTGGATTTTACACAAGAAAAGCCAGTAACTTGAAGAAAATTGCTAATATTTGCCTCATGATGTATGATGGAGACATACCTAGCTCAATTGGGGACCTACTCTTGCTGCCAGGAGTAGGTCCAAAGATTGCTCATCTGGTTATGATTAAGGGATGGAACAATGTCCAAGGGATATGTGTAGATACTCACGTCCACCGCATTTGCAATCGTCTTGGGTGGGTTTCGAGATCAGGCTCGAAACAGAAAACTTTGACACCAGAAGAAACCAGGCAAGGGCTGCAACGATGGCTTCCGAAGGAAGAATGGGTTCCAATAAATCCTCTTTTGGTAGGATTTGGACGATCAATTTGTACTCCTCTACGGCCTCACTGTGGAGAGTGTCTTGTAAGTAGCTTCTGTCCATCAGCATACAAGGAGGCTTCAAGCTTTTCCAACTCCAAAAAACTTACATTGAACAAGAAGCCTTAA 957 0.4399 MSVVSVFGLGRIHVSLSAKTTQSFSSKPHPVSQLGASVTSKGTRKRLQLQHVPEIETENHQKEIPGFANELVPRGEAPENWEKVLQGIRQMRSSADEHEPVAREEAADNSERRFAVLASSLLSSQTKEHVTRGATQRLRENGLLTAEAMNKADEETIKNLIYPVGFYTRKASNLKKIANICLMMYDGDIPSSIGDLLLLPGVGPKIAHLVMIKGWNNVQGICVDTHVHRICNRLGWVSRSGSKQKTLTPEETRQGLQRWLPKEEWVPINPLLVGFGRSICTPLRPHCGECLVSSFCPSAYKEASSFSNSKKLTLNKKP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01732 318 FunFam Endonuclease III-like protein 1 109 213 - -
Phco10g01732 318 Gene3D - 212 302 IPR023170 -
Phco10g01732 318 CDD ENDO3c 114 276 IPR003265 GO:0006284
Phco10g01732 318 Hamap Endonuclease III-like protein 1 [NTHL1]. 77 302 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Phco10g01732 318 ProSitePatterns Endonuclease III family signature. 187 216 IPR004036 -
Phco10g01732 318 SMART ccc3 279 299 IPR003651 GO:0051539
Phco10g01732 318 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 50 311 - -
Phco10g01732 318 FunFam Endonuclease III homolog 212 302 - -
Phco10g01732 318 SUPERFAMILY DNA-glycosylase 110 302 IPR011257 GO:0003824|GO:0006281
Phco10g01732 318 Gene3D Hypothetical protein; domain 2 102 211 - -
Phco10g01732 318 SMART endo3end 122 278 IPR003265 GO:0006284
Phco10g01732 318 Pfam HhH-GPD superfamily base excision DNA repair protein 119 247 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01732 Phco-Chr10 39919041 39922478 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01732 10 39919041 39922478 Phco10g01732 10 39919041 39922478 ECH
Phco10g01732 10 39919041 39922478 Phco9g00619 9 4515152 4520457 PCT