Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01479 ATGGTTAGTCAACTGCTTTTGTTTTTATGGAAGGGAGTAAGATTGATTCAGAATCAGAGGTTTGTGTTTGTGTTTGCGCATTGTGGATTGTGGATTCGAAATCCAATTAGAATGCAGAGATCCGGGTATGGCTCCGACGGAATATTCAGATCCCTCAGACCTTCAATCGCTCTCCCCAAACAACCCAACCTCACACTCGTTTCCCACCTATTCAACAGAGTCGCACCCTTTCCCTCCAAACACGCCCTTATCGATGCCGATTCTTCCCAAACCCTTTCATTCGCGCAGTTCAAGTCGCTAACCGTTAAAGTCTCCCACGGCCTCCTCCGTCTCGGCGTCGCCAAAAACGACGTCGTCCTCTTCCTTGCCCCCAACGACATCCGCTACATCGTCTGCTTCCTCGCCGTCACCTCCCTCGGCGCCATTGTCACTACCGTCAACCCCGCCTACACCGCCGCCGAGGTCTCCAAACAGGCCAAAGACTCCAATCCCAAATTTGTCGTCACTGTCCCCGAACTCTGGGACAAGCTCCAACACTTTAACCTCCCCGCGGTGTTCCTCCACTCCCGCGCGCACTCCCACGCGACTAGCTTCGACGCGCTCGTCCATCTCGCTGGGTCGCCCACCGAGTTTCCGAAAGTTGACGTCAAACAGAGTGACACGGCGGTGCTGCTGTACTCCTCCGGGACCACTGGCGTGAGCAAGGGCGTGGTTCTAACGCACGGGAACTTTGTGGCGGCATCGTTGATGATAGGATTGGACGATGATTTGGCCGGGGAGATGCATAGCGTGTTCCTCTGCGTTCTGCCGATGTTTCATGTGTTTGGTTTGACGGTGATTTCGTACTCGCAGCTTCAGAGGGGCAGTGCTGTGGTGTCTCTGAAGAAGTTTGAGTTTGAACTGGTTTTGAAGACGATTGAGAAGTTTAGTGTGACGCATTTGTGGGTTGTGCCTCCGATTATTCTTGCTTTGGCCAAACATGGTTTGGTTGATAAGTATGATCTTTCCTCGCTGAAGCATATTGGTTCTGGCGCTGCTCCTCTTGGGAAAGAGTTGATGGAGGAGTGTGCCAAACGTTTCCCTCGTGCCACTGTTGCTCAGGGATATGGTATGACTGAAACTTGTGGTATTGTTTCTGTGGAGAATACAAGGATGGGGATTCGGCATAGTGGCTCTGCGGGAATGCTTGTTGCGGGAGTGGAAGCTCAAATAGTTAGCGTGGATACGCTGAAGCCTCTCCCTCCTGGACAATTGGGGGAGATATGGGTACGGGGTCCTAATATGATGCGAGGATATCACAACAATCCCCAAGCCACAAGATTGACTATAGATAAAAAAGGTTGGGTACATACAGGAGATCTTGGATATTTTGACGAGGATGGGCAACTTTTTGTTGTTGACCGTATCAAAGAATTGATCAAGTATAAAGGTTTTCAGGTTGCACCAGCAGAACTGGAAGGGCTTCTTGTTTCTCACCTTGAAATACTTGATGCTGTTGTCATCCCATATCCCGATGCTGAAGCTGGTGAGGTTCCAGTTGCCTATGTCGTTCGCTCACCCAATAGTTCACTGACTGAGGAAGATGTTCAAAAGTTTATTGCTAATCAGGTAGCACCTTTCAAAAGACTACGAAGGGTGACATTCATCAATGCTGTTCCTAAGACGGCATCTGGAAAAATTCTCCGAAGAGAGCTTATTGAGAAAGTAAGATCCAAAATATGA 1722 0.4959 MVSQLLLFLWKGVRLIQNQRFVFVFAHCGLWIRNPIRMQRSGYGSDGIFRSLRPSIALPKQPNLTLVSHLFNRVAPFPSKHALIDADSSQTLSFAQFKSLTVKVSHGLLRLGVAKNDVVLFLAPNDIRYIVCFLAVTSLGAIVTTVNPAYTAAEVSKQAKDSNPKFVVTVPELWDKLQHFNLPAVFLHSRAHSHATSFDALVHLAGSPTEFPKVDVKQSDTAVLLYSSGTTGVSKGVVLTHGNFVAASLMIGLDDDLAGEMHSVFLCVLPMFHVFGLTVISYSQLQRGSAVVSLKKFEFELVLKTIEKFSVTHLWVVPPIILALAKHGLVDKYDLSSLKHIGSGAAPLGKELMEECAKRFPRATVAQGYGMTETCGIVSVENTRMGIRHSGSAGMLVAGVEAQIVSVDTLKPLPPGQLGEIWVRGPNMMRGYHNNPQATRLTIDKKGWVHTGDLGYFDEDGQLFVVDRIKELIKYKGFQVAPAELEGLLVSHLEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDVQKFIANQVAPFKRLRRVTFINAVPKTASGKILRRELIEKVRSKI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01479 573 Gene3D - 46 470 IPR042099 -
Phco10g01479 573 SUPERFAMILY Acetyl-CoA synthetase-like 60 571 - -
Phco10g01479 573 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Phco10g01479 573 FunFam Long-chain-fatty-acid--CoA ligase FadD 50 470 - -
Phco10g01479 573 FunFam 4-coumarate--CoA ligase 2 471 572 - -
Phco10g01479 573 CDD 4CL 58 565 - -
Phco10g01479 573 Pfam AMP-binding enzyme C-terminal domain 484 559 IPR025110 -
Phco10g01479 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 46 568 - -
Phco10g01479 573 Gene3D - 471 572 IPR045851 -
Phco10g01479 573 Pfam AMP-binding enzyme 72 475 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01479 Phco-Chr10 37471868 37476002 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01479 10 37471868 37476002 Phco10g01479 10 37471868 37476002 ECH
Phco10g01479 10 37471868 37476002 Phco9g00928 9 7406764 7409962 PCT