Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01119 ATGCAAGCACCTTCACTCATCGAACCCTCGTTCCACCCAAACAGATACAGTCTACTCAACATAATGGCGGCTGCGACGACGTCGTTTTCTTCTGCAATCTATGCCCCCTCTGAAACCCTAGCCAAACCTTCTTACAGAAGCTTCTCCGCTACCAGCCTCCCTCTGCAATCCTCGTCTTCCAAACTCGCCTTCAAATCCCTAAGGCTGAGCCGATGCGGCTCCGCTCTCGGCGCTCGTATGGTGGCGGCGCCAGCTGTGAAGACCCCTGCGCAGCTCGATTTCGACTCGAAGGTTTTCAAGAAGGAGAAGATTAACCTCGCCGGACACGACGAGTACATCGTGAGAGGAGGCAGGGATTTGTTCCACCTTTTGCCCGACGCTTTCAAGGGGATCAAGCAGATTGGTGTCATCGGCTGGGGATCTCAGGGACCTGCCCAGGCTCAGAATCTAAGGGACTCGCTCGCTGAAGCAAAGTCCGATATTGTGGTCAAGATTGGACTCAGGAAGGGTTCTCGTTCCTTTGCTGAAGCTCGGGCAGCTGGGTTTACTGAGGAGAGTGGGACTCTTGGTGACATATGGGAAACTGTCTCGGGCAGTGATCTTGTGATGTTGTTAATTTCTGATTCCGCACAGGCTGATAATTATGAAAAAATATTTTCTTACATGAAACCAAACAGCATACTTGGGCTTTCCCATGGTTTTCTTCTTGGGCATTTGCAGTCAATTGGACTTGACTTTCCTAAGAACATTAGTGTAATTGCTGTGTGCCCAAAGGGGATGGGTCCATCTGTAAGGAGGCTCTATGTGCAAGGCAAAGAAATAAATGGTGCTGGAATCAATGCTAGTTTTGCCGTCCACCAGGATGTGGATGGTAGGGCCACTGATGTTGCTTTGGCATGGTCTGTTGCCCTTGGTTCTCCATTCACTTTCGCCACTACATTAGAGCAAGAATACAAGAGTGATATCTTTGGGGAGAGAGGCATTTTACTTGGTGCTGTTCATGGAGTTGTGGAATCCTTGTTTAGGAGATACACTGACAATGGAATGGACGAAGATCTGGCGTACAAGAATACTGTTGAGTCTATAACTGGAATTATATCTAGAACCATCTCAACCAAGGGTATGCTAGCTGTATACAATGCTTTATCTGAAGATGACAAAAGGGTATTTGAGAAAGCTTACAGTGCTTCTTATTATCCTTGCATGGACATTCTGTATGAGTGCTACGAGGATGTAGCCAGTGGTAGCGAGATTCGCAGTGTTGTTTTGGCTGGACGTCGCTTTTATGAGAAAGAGGGTCTGGCTGCTTTCCCCATGGGTAACATTGACCAAACCCGCATGTGGAAGGTTGGCGAGCGTGTCCGTTCTACAAGACCAGCCGGTGATCAAGGCCCATTATATCCTTTTACTGCTGGTGTCTTTGTGGCATTGATGATGGCCCAGATTGAGATCCTGAGGAAGAAAGGGCATTCCTACTCCGAAATCATTAATGAGAGTGTCATCGAGGCTGTTGATTCTTTGAATCCTTTCATGCATGCTCGTGGTGTTTCTTTCATGGTTGATAACTGCTCAACCACGGCTAGATTGGGTTCGAGGAAATGGGCTCCACGATTTGACTACATTCTTACCCAGCAGGCCTTGGTGGCGGTGGACAATGGAACACCTGTTAACCAGGACTTAGTTAGCAACTTCCTTTCAGACCCAGTGCATGGAGCCATTGAAGTTTGCGCCAAACTGAGACCCACAGTAGACATTTCTGTGCCAGCAGATGCAGACTTCGTTCGTCCAGAGTTGCGCCACGCCAGCAATTAG 1812 0.4834 MQAPSLIEPSFHPNRYSLLNIMAAATTSFSSAIYAPSETLAKPSYRSFSATSLPLQSSSSKLAFKSLRLSRCGSALGARMVAAPAVKTPAQLDFDSKVFKKEKINLAGHDEYIVRGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSRSFAEARAAGFTEESGTLGDIWETVSGSDLVMLLISDSAQADNYEKIFSYMKPNSILGLSHGFLLGHLQSIGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINASFAVHQDVDGRATDVALAWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGVVESLFRRYTDNGMDEDLAYKNTVESITGIISRTISTKGMLAVYNALSEDDKRVFEKAYSASYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLAAFPMGNIDQTRMWKVGERVRSTRPAGDQGPLYPFTAGVFVALMMAQIEILRKKGHSYSEIINESVIEAVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNGTPVNQDLVSNFLSDPVHGAIEVCAKLRPTVDISVPADADFVRPELRHASN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01119 603 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 472 541 IPR000506 GO:0004455|GO:0009082
Phco10g01119 603 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 315 459 IPR000506 GO:0004455|GO:0009082
Phco10g01119 603 FunFam Ketol-acid reductoisomerase 308 581 - -
Phco10g01119 603 ProSiteProfiles KARI C-terminal domain profile. 472 598 IPR000506 GO:0004455|GO:0009082
Phco10g01119 603 Pfam Acetohydroxy acid isomeroreductase, NADPH-binding domain 132 306 IPR013116 -
Phco10g01119 603 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 315 600 IPR008927 -
Phco10g01119 603 ProSiteProfiles KARI C-terminal domain profile. 313 461 IPR000506 GO:0004455|GO:0009082
Phco10g01119 603 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 310 IPR036291 -
Phco10g01119 603 Gene3D - 80 307 - -
Phco10g01119 603 ProSiteProfiles KARI N-terminal domain profile. 114 312 IPR013116 -
Phco10g01119 603 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 91 491 IPR013023 GO:0009082|GO:0016491
Phco10g01119 603 PIRSF Ilv5_plant 20 602 IPR016206 GO:0004455
Phco10g01119 603 Gene3D - 308 581 IPR013328 GO:0016491
Phco10g01119 603 FunFam Ketol-acid reductoisomerase 80 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01119 Phco-Chr10 32958063 32962465 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01119 10 32958063 32962465 Phco10g01119 10 32958063 32962465 ECH
Phco10g01119 10 32958063 32962465 Phco9g01527 9 35659442 35663761 PCT