Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00377 ATGATTCCAATAAAGAGAAGACAAAGAGGTGCTCCAGTCACAATGCACTCAGTTGGTCCTCAAGTTCATCCTAGTGGGCAAGATGAAGACTACAATCTGAGGGAGACCCAGCCACAGCTCGGGGGGGAGCCGTGGCCAAATGCCAGAAGAGGGTGGATGACTGGTGGTGAAAGATTCACAAGCACACATGACCTTGTTGAGCAGATGTTTTATCTGTATGTTAGGGTAGTGAAAGCCAAGGATCTTCATCGCAGCACTCTTACCTCAAGCTGTGATCCTTACGTAGAAGTGAAGCTGGGGAACTACAAAGGGAGAACAAAGCACATAGAGAAGAAAACAAATCCAGAATGGAACCAAGTCTACGCTTTCTCCAAAGACAGAATTCAATCTTCTGTTTTGGAAGTCATAGTGAAAGACAAAGAAATGTTGGGAAGAGATGAATGTATTGGAAGGGTGGCATTTGATCTCAATGAGGTTCCAACCAGAGTCCCCCCAGATAGTCCACTAGCTCCTCAGTGGTACAGACTCGAGGACCGGCGAGGAGGTGACATCATGCTTGCTGTGTGGATGGGAACTCAAGCTGATGAGGCCTTCTCAGAGGCTTGGCATTCTGATGCTGCCACTGTGTATGGAGAGGGTGTTTTCAATGCCAGATCAAAGGTTTATTTGTCACCAAAACTGTGGTATCTCAGGGTGAATGTCATTGAAGCACAAGATGTGATACCAAGTGACAGAAACCGGCTGCCAGAGGTTTTTGTCAAGGCGCAGATGGGGAGCCAGGTGTTGAAGACCAAGATATGTCCAACTAGGACAACCACACCACTTTGGAATGAAGATTTGGTCTTTGTGGCGGCTGAACCATTTGAGGAGAAGTTGACAATCACTGTGGAGGATCGCGTGCACCCTTCAAAAGATGAAGTACTTGGGAAGATGATCTTGCCACTGACCCTCTTTGAGAAGCGGCTAGACCACAGGCCAGTTCATTCACGCTGGTTCAATCTTGAGAAGTTTGGTTTTGGAATGATGGAAGCTGATAGGAGAAATGAGCTTAAATTTTCAAGCAGGATTCACCTAAGAATTTGCCTTGAAGGTGGATACCACGTCCTTGATGAGTCCACTTTCTACTCAAGTGACCAAAGACCAACAGCTAGACAGCTATGGAAGCAGCCTATTGGGGTACTTGAAGTAGGCATCTTAGGAGCACAAGGACTCCTCCCAATGAAGATGAGGGATGGCCATGGCAGCACAGATGCATACTGTGTTGCCAAGTACGGTCAAAAATGGGTTAGAACCAGAACAATTGTTGACACTCATAGTCCAAAATGGAATGAGCAGTACACATGGGAGGTTTATGATCCTTGCTCTGTAATAACACTTGGTGTTTTTGACAATTGCCATTTAGGTGGGGGCGAAAAAGCCACTGCGGGCACTGCGGCCAGGGATTCAAGAATTGGAAAGGTAAGAATTAGACTCTCAACACTTGAAGCTCAAAGGATATACACTCATAGTTATCCACTTCTTGTTTTGCACACACATGGTGTTAAGAAAATGGGTGAGCTTCAGCTAGCCGTGAGGTTCACTAGCCTCTCACTGGCTAACATGATTTACATTTATGGCCAACCCTTGCTTCCAAAGATGCATTACTTGCGCCCTTTCACAGTTAACCAAATAGAGAGTTTGAGGTACCAAGCCATGAACATTGTGGCCGAGAGGCTTGGAAGAGCTGAACCTCCCCTCAGGAAGGAGGTGGTGGAGTACATGTTGGATGTTGATTCCAATATGTGGAGCATGAGAAGAAGCAAAGCCAACTTCTTCCGCATCATGTCACTTTTCTCTGGCATCATAACAATAGGGCAGTGGTTTAGCCAAGTTTGCAATTGGAAGAGCCCCATCACATCCGTCCTAGTTCACATTCTCTTCCTAATACTAATTTGCTACCCTGAATTGATACTTCCAACTTTGTTTCTCTACATGTTCTTGATTGGCCTGTGGAACTATAGGTTTAGGCCAAGAAACCCACCTCACATGGACACAAAACTCTCATGGGCAGAAGCAGTTCACCCTGATGAACTTGATGAAGAGTTTGACACATTCCCAACTTCTAGACCACAAGATGTGGTGAGAATGAGGTATGACAAACTTAGAAGTGTTGCAGGAAGGATCCAAACAGTAGTTGCAGACATAGCAACGCAGGGAGAGAGGTTTCATTCTCTACTGAGTTGGAGAGACACCAGAGCCACCAGCCTCTTCGTAGTATTCAGTTTGTGTTCAGCTGTGGTTCTGTATGCAACACCACCAAAAGTGGTAGCTATGGTAACAGGTGTGTATTATCTAAGGCATCCAAAGTTTCGTAGCAAACTTCCTTCTGTACCCATCAACTTCTTCAAGAGGCTTCCAGCTAGAACAGATAGCATGCTGTGA 2421 0.4572 MIPIKRRQRGAPVTMHSVGPQVHPSGQDEDYNLRETQPQLGGEPWPNARRGWMTGGERFTSTHDLVEQMFYLYVRVVKAKDLHRSTLTSSCDPYVEVKLGNYKGRTKHIEKKTNPEWNQVYAFSKDRIQSSVLEVIVKDKEMLGRDECIGRVAFDLNEVPTRVPPDSPLAPQWYRLEDRRGGDIMLAVWMGTQADEAFSEAWHSDAATVYGEGVFNARSKVYLSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAQMGSQVLKTKICPTRTTTPLWNEDLVFVAAEPFEEKLTITVEDRVHPSKDEVLGKMILPLTLFEKRLDHRPVHSRWFNLEKFGFGMMEADRRNELKFSSRIHLRICLEGGYHVLDESTFYSSDQRPTARQLWKQPIGVLEVGILGAQGLLPMKMRDGHGSTDAYCVAKYGQKWVRTRTIVDTHSPKWNEQYTWEVYDPCSVITLGVFDNCHLGGGEKATAGTAARDSRIGKVRIRLSTLEAQRIYTHSYPLLVLHTHGVKKMGELQLAVRFTSLSLANMIYIYGQPLLPKMHYLRPFTVNQIESLRYQAMNIVAERLGRAEPPLRKEVVEYMLDVDSNMWSMRRSKANFFRIMSLFSGIITIGQWFSQVCNWKSPITSVLVHILFLILICYPELILPTLFLYMFLIGLWNYRFRPRNPPHMDTKLSWAEAVHPDELDEEFDTFPTSRPQDVVRMRYDKLRSVAGRIQTVVADIATQGERFHSLLSWRDTRATSLFVVFSLCSAVVLYATPPKVVAMVTGVYYLRHPKFRSKLPSVPINFFKRLPARTDSML 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00377 806 CDD C2D_MCTP_PRT_plant 393 523 IPR047255 -
Phco10g00377 806 CDD C2C_MCTP_PRT_plant 229 381 IPR047258 -
Phco10g00377 806 MobiDBLite consensus disorder prediction 1 47 - -
Phco10g00377 806 Pfam C2 domain 228 334 IPR000008 -
Phco10g00377 806 Pfam C2 domain 392 506 IPR000008 -
Phco10g00377 806 Pfam C2 domain 71 174 IPR000008 -
Phco10g00377 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 71 206 IPR035892 -
Phco10g00377 806 ProSiteProfiles C2 domain profile. 375 504 IPR000008 -
Phco10g00377 806 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 24 806 IPR047259 -
Phco10g00377 806 FunFam C2 domain-containing protein 375 530 - -
Phco10g00377 806 ProSiteProfiles C2 domain profile. 209 332 IPR000008 -
Phco10g00377 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 228 383 IPR035892 -
Phco10g00377 806 SMART C2_3c 71 168 IPR000008 -
Phco10g00377 806 SMART C2_3c 229 329 IPR000008 -
Phco10g00377 806 SMART C2_3c 393 503 IPR000008 -
Phco10g00377 806 ProSiteProfiles C2 domain profile. 53 174 IPR000008 -
Phco10g00377 806 Pfam Plant phosphoribosyltransferase C-terminal 651 806 IPR013583 -
Phco10g00377 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 392 528 IPR035892 -
Phco10g00377 806 FunFam C2 domain-containing protein 215 362 - -
Phco10g00377 806 FunFam C2 domain-containing protein 66 207 - -
Phco10g00377 806 CDD C2B_MCTP_PRT_plant 71 192 IPR047257 -
Phco10g00377 806 Gene3D C2 domain 59 191 IPR035892 -
Phco10g00377 806 Gene3D C2 domain 216 362 IPR035892 -
Phco10g00377 806 Gene3D C2 domain 375 530 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00377 Phco-Chr10 3418284 3420704 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01600 2 46328598 46330925 Phco10g00377 10 3418284 3420704 ECH
Phco6g00237 6 2327734 2330058 Phco10g00377 10 3418284 3420704 ECH
Phco6g03180 6 52372788 52381060 Phco10g00377 10 3418284 3420704 ECH
Phco10g00377 10 3418284 3420704 Phco10g00377 10 3418284 3420704 ECH