Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03841 ATGAACTTCCATTGCAAAATAAAAATGAATGTGAGTAATTTCGCATTTTCCATAGCCATGGCTGTTCTGTGTGTATCTAGCATAGTGTTCACACAAGCAGAATTCCGATTCCCCAAAGAAATAGCCTCAAAGCTTAATCGTGACCCTGAAATCCTTTCACTGGCATCAACAGATTATGGCCAAATAGTTCAGCAAACCCCATTAGAAGTTTTTGAGCCATCTTCGGTTAGGGATATCTCAGCTTTGATAAATTTCTCAAACTCTCTTGCCACCCCATTCACCATAGCCCCCAGAGGCAAAGCTCACTCGATTCTTGGGCAAGCCCTAACAGGAAATGGGGTGGTGCTGAACATGACTAACCTCAATGGGTCACTGATTTTTGTTTCGAATTGTGATGGAGAGAATCCATTGAATTGCTATGCTGATGTTGGTGGTGAAGTGCTGTGGATTGATGTGTTGCATGCAACCCTTGAACGTGGACTCACACCTCTCTCTTGGACTGATTATCTGTATTTGACTGTTGGTGGAACTCTCTCTAATGCTGGAATCAGTGGCCAAGCCTTTCGATTTGGTCCCCAGATCTCCAATGTTCTTCAGTTGGATGTTGTCACAGGGAAAGGAGACCTTGTGAGTTGCTCTAGGGAGAAGGACTCAGAGTTATTTTATGGTGTTCTTGGAGGATTAGGTCAATTTGGTGTAATAACAAGAGCAAGAATACCTCTAGGACCTGCACCTACTAGGGTGAAATGGCTCCATCTGCTTTACAACAACTTCACTGCATTTTCGAGCGACCAAGAACATTTAATCTCTTTTAGTGAGAAGGATGACACTACTGCAGCAGATTATGTAGAAGGCATGCTTCTACTGAATCAGCCACCATTGGATCTTTCCTTTTATCCAGATTCTGATCATCAAAGGATAACTTCATTAGTAACTCAAAATGGCATAATCTACATCATAGAACTTGTCAAATACTATGACAACAACTCTAATGCATTCGTGGAGAAGGATGTGGCAGATTTGGTAAAAGGGCTAAACTTCGTACCAACATTTATCTTCGAAAAAGATGCATCGTACGAGGATTTTCTGAATAGAGTTCATGCAGAAGAGTTATTTCTAAGGTCAAAAGGACTTTGGGAAGTTCCTCATCCTTGGTTGAACATCTGGATTCCAAGATCTCGAATCTCAGATTTTAACGAAGGTGTCTTCAAGAACATTATTCTTATGCAAAACATTTCTAGCGGAATTGCTTTAATATACCCAATGAACCGAAACAAGTGGGATGATAAGATGTCACCAGTTACACCAGAGGAAGATGTTTTCTACGCTGTAAGTCTTTTGCGTGCTACAAGTTCAATAGATATGGTGAAGAAATTGCAGGATCAAAACCAACAAATATTACAGTTCTGTAAGGATGCTGGTATTCAGATCACGGAATATCTAACTGGGAACAAAACACAACAACAATGGATGGAACACTTTGGCTCGAAATGGGAACTTTTTGCTGATAGAAAAGCTCAATTTGATCCCAAAAGAATATTGTCACCTGGACAAGGAATTTTCCAAATCCAATCCATATAA 1581 0.4042 MNFHCKIKMNVSNFAFSIAMAVLCVSSIVFTQAEFRFPKEIASKLNRDPEILSLASTDYGQIVQQTPLEVFEPSSVRDISALINFSNSLATPFTIAPRGKAHSILGQALTGNGVVLNMTNLNGSLIFVSNCDGENPLNCYADVGGEVLWIDVLHATLERGLTPLSWTDYLYLTVGGTLSNAGISGQAFRFGPQISNVLQLDVVTGKGDLVSCSREKDSELFYGVLGGLGQFGVITRARIPLGPAPTRVKWLHLLYNNFTAFSSDQEHLISFSEKDDTTAADYVEGMLLLNQPPLDLSFYPDSDHQRITSLVTQNGIIYIIELVKYYDNNSNAFVEKDVADLVKGLNFVPTFIFEKDASYEDFLNRVHAEELFLRSKGLWEVPHPWLNIWIPRSRISDFNEGVFKNIILMQNISSGIALIYPMNRNKWDDKMSPVTPEEDVFYAVSLLRATSSIDMVKKLQDQNQQILQFCKDAGIQITEYLTGNKTQQQWMEHFGSKWELFADRKAQFDPKRILSPGQGIFQIQSI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03841 526 Gene3D - 247 480 IPR016170 -
Phac9g03841 526 Pfam FAD binding domain 68 213 IPR006094 GO:0050660
Phac9g03841 526 Gene3D - 118 246 IPR016169 -
Phac9g03841 526 ProSiteProfiles PCMH-type FAD-binding domain profile. 63 244 IPR016166 GO:0071949
Phac9g03841 526 PANTHER GULONOLACTONE OXIDASE 29 522 - -
Phac9g03841 526 Gene3D - 49 521 IPR016167 -
Phac9g03841 526 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 245 521 IPR015345 GO:0009690|GO:0019139|GO:0050660
Phac9g03841 526 SUPERFAMILY FAD-binding/transporter-associated domain-like 46 243 IPR036318 GO:0050660
Phac9g03841 526 SUPERFAMILY FAD-linked oxidases, C-terminal domain 245 521 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03841 Phac-Chr9 37174282 37180242 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03841 K00279 - gmx:100793158 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g03841 9 37174282 37180242 Phac9g03841 9 37174282 37180242 ECH
Phac3g01775 3 20411234 20416716 Phac9g03841 9 37174282 37180242 PCT