Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01775 ATGGCAAGTTATTTTAGATTTTCGAAAGCTTTGGTTATGCTAGGGTTAACCTTCGCAGTGCTCACACAGGCACAATCACAACCTTGGTCATTACTCCAAGCACCAAAAGACCTAACCCTGAAGCTTATTCGTGATCCTGTGACCCTTTCATTAGCCTCAACAGACTTTGGCCACATAGTTCATGACAACCCTTTTGCAATTTTTTCTCCATCGTCCATTAGTGACATCTCTCTGTTGATAAATTTCTCGAATTCTCTCCCCATCCCTTTCACCATAGCTCCTAGAGGGCAAGCACATTCGGTTAACGGACAAGCCATGACAAATGACGGGGTTGTGGTGAACATGACTCAGTTGAATGGGTTTAGAAACGGGTCTGGGATTGTAGTAGTGTCTGATGGCACTCCATATGCTGATGTGGGTGGAGAACAAATTTGGATTGATGTGTTGCATGCAACACTTGAACACGGACTCACACCACTCTCTTGGACTGACTACTTGTTCTTATCGGTTGCTGGAACTCTCTCCAATGCAGGGATTAGTGGCCAATCCTTCAGGTTTGGTCCTCAGATTTCCAATGTTCATCAATTGGATGTTGTTACAGGGAAAGGAGACCTAGTGACATGTTCTTCGGAGAACAACTCAGAGTTATTTTATGCCGTCCTAGGAGGACTAGGTCAATTTGGAATTATAACTAGGGCAAGAATAGCTCTTGGACCTGCACCAACTAGGGTGAAGTGGCTCCGTTTGCTTTACAACAATTTCTCTGCTTTTTCTGCAGACCAAGAACACTTAATCTCGTTGAATGGAAGAAACGAGACCATTGCTGCTGATTATGTAGAAGGTTTCCTTCTGCTAAATCAGCCACCATTGGATCTTTCCTCTTTTCCAGCACCTGATCAACCTCGTATATCTTCCCTAGTAACACAATACGGCATCATCTATATCATAGAGCTTGTGAAATATTACGACAATAGTACTCAAGAACATGTTGAAGAGGAAGTAAGACTTTTGGTGGAGGGGTTGAAGTTTGTTCCTACGTTTATGTTCGAAAAAGATGTATCATACGAAGAGTTCCTGAACAGAGTTCATTCTGACGAGCTTTTCTTAAGATCACAAGGACTTTGGGATGTCCCTCATCCTTGGATAAACCTCTTTGTTCCAGGATCTCGAATCTCAGATTTCAATGAAGGTGTGTTCAAGGGCATTATTCTGAAGCAAAATATAACTGCAGGAATTGCGATAATCTACCCCATGAATCGATCCAAGTGGAATGATAAGATGTCTGCAGTTACACCTAATGAAGATGTTTTCTATGTTGTGTCACTTCTTCATGCAACTGGGTTTGATAAAGTGGAGGAATTTCAAGCTCAAAACCAACAAATATTAGATTTCTGTGAGGATGCTGTAAATGGTAGCCCGACTAAGGAGTTTACTCCAAAGAAAGGTTTGAGGCAAAGAGATCCTTTAGCACCGTTTTTCTTTCTTAAAGCATTCAAAGGACTAGCTGGGGTTTCTAGGAATGCTGTTGACAAAAACTTGTTTGAGAGTGTTGGGGTTGGGTACAAGAAGGTTAAGGTCCATATGCTTCAGTATGCAGATGACACCTTGTTTTTTTGCACTGCCAGCATTAAAAGTGTGTACAACCTTAGGTTATGTTGA 1659 0.4183 MASYFRFSKALVMLGLTFAVLTQAQSQPWSLLQAPKDLTLKLIRDPVTLSLASTDFGHIVHDNPFAIFSPSSISDISLLINFSNSLPIPFTIAPRGQAHSVNGQAMTNDGVVVNMTQLNGFRNGSGIVVVSDGTPYADVGGEQIWIDVLHATLEHGLTPLSWTDYLFLSVAGTLSNAGISGQSFRFGPQISNVHQLDVVTGKGDLVTCSSENNSELFYAVLGGLGQFGIITRARIALGPAPTRVKWLRLLYNNFSAFSADQEHLISLNGRNETIAADYVEGFLLLNQPPLDLSSFPAPDQPRISSLVTQYGIIYIIELVKYYDNSTQEHVEEEVRLLVEGLKFVPTFMFEKDVSYEEFLNRVHSDELFLRSQGLWDVPHPWINLFVPGSRISDFNEGVFKGIILKQNITAGIAIIYPMNRSKWNDKMSAVTPNEDVFYVVSLLHATGFDKVEEFQAQNQQILDFCEDAVNGSPTKEFTPKKGLRQRDPLAPFFFLKAFKGLAGVSRNAVDKNLFESVGVGYKKVKVHMLQYADDTLFFCTASIKSVYNLRLC* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01775 552 Gene3D - 115 242 IPR016169 -
Phac3g01775 552 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 239 IPR036318 GO:0050660
Phac3g01775 552 Pfam FAD binding domain 66 209 IPR006094 GO:0050660
Phac3g01775 552 Gene3D - 46 114 IPR016167 -
Phac3g01775 552 PANTHER GULONOLACTONE OXIDASE 28 481 - -
Phac3g01775 552 SUPERFAMILY FAD-linked oxidases, C-terminal domain 241 468 IPR016164 GO:0003824|GO:0050660
Phac3g01775 552 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 241 471 IPR015345 GO:0009690|GO:0019139|GO:0050660
Phac3g01775 552 Gene3D - 243 477 IPR016170 -
Phac3g01775 552 ProSiteProfiles PCMH-type FAD-binding domain profile. 60 240 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01775 Phac-Chr3 20411234 20416716 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01775 K00279 - gmx:100808553 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01775 3 20411234 20416716 Phac9g03841 9 37174282 37180242 PCT