Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02634 ATGGCTGAAGAAGCTTCAAAGACAACCACAACTCAAGAGGAAGTGGTGGTCGCTGACGTGGCACCTCCTGAACCATCAGACACCAGCGTTGTTGTTTCCGTTGAAGAAGAAGAAGAAGCAAAGGCATCCCCTCAGAAGGAGAACATTCCAGAAACTGAGACGGAGGTTTCCAAAGATAACATTCCGGAATCAGGTTCTTTCAAGGAAGAGAGCACCATTGTCTCGGACCTACCAGAAACCGAGAAAAAGGCACTGCAAGAACTCAAACAACTCATTCAGGAGGCACTCCACAAACACGAGTTTTCTGCGCCTCAGAATAACCACCCTCCCAAAGATGAAAAGCACGAAGATGCCACCGACAACAAGGAAGAACAGAAGCCCGTGGAGGAAGAGAAAGAACATGCTGTTCATGCTGCTGCTGATGCTGCTGACGTAGCAGAAGCGACAGAAAAAGAAGCTGCGGAAGTGAAGGAAAGTGAAACTGAAACTAAGGTTGTTGAAGAGAAAGTGGCAGTTACCGATGCTACTTGTGTTGAGGAGGATGGAGCGAAAACGGTGGAGGCTATCGAGGAGAGCGTAGTGCCTGTGACTGTGTCTGAGGAGGAAGCGAAGGTGGAAGCTGATTCCGCTTCCCCCGAAGAGGTTTCGATTTGGGGAGTGCCGCTTCTTGCTGATGAAAGGAGCGATGTGATTCTGCTGAAGTTTCTGCGTGCGAGGGACTTCAAGGTGAAGGATGCGTTTGCGATGATAAAGGGGACGATTCGGTGGAGGAAGGAGTTCGGGATGGAGGAGTTGTTGGAGGAGGAGTTGGGAGATGATTTGGAGAAGGCGGTGTACATGCATGGGTTTGACAAGGAGGGTCACCCTGTGTGTTATAACATCTATGGGGAGTTTCAGAACAAGGAGTTGTACAAGAAGAGTTTCTCTGATGAGGAGAAGAGGCACAGGTTCCTCAGGTGGAGGATTCAGTTCCTGGAGAAGAGTATCAGGAAGCTTGATTTTGCCCCTGGTGGGATAAGCACCATTGTTCAAGTCAATGATCTCAAGAACTCTCCTGGACCTGCCAAGTGGGAGCTTAGACAGGCTACCAAACAGGCCCTGCAGTTGCTTCAGGATAACTATCCTGAGTTTGTAGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACTTAGCAGTGAACAGGATGATAAGCCCTTTTCTTACTCAGAGAACCAAAAGCAAGTTTGTCTTTGCTGGCCCTTCCAAATCAGCCGAGACTCTTTTGAGATACATTGCTGCTGAGCAACTTCCGGTGAAGTATGGTGGACTAAGCAAAGATGGCGAATTCGGAATTTCCGATGCTGTCACAGAAATTACAGTGAGGCCAGCAGCAAAACATACCGTGGAGTTTCCAGTTGCTGAGAACTCCCAACTGTCTTGGGAAATCAGAGTAATAGGGTGGGACGTAAGCTATGGTGCAGAGTTTGTGCCAAGTTCAGAGGGAAGCTATACTGTGATCATCCAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAACCGGTGCTTTGCAACAATTATAAAATTGGTGAACCTGGGAAGGTGGTTCTCACCATTGACAACCAAAGCTCTAAGAAGAAGAAACTCTTGTACCGCTTGAAGGTGAAGCCCTCCTCTTCTGACTGA 1662 0.4819 MAEEASKTTTTQEEVVVADVAPPEPSDTSVVVSVEEEEEAKASPQKENIPETETEVSKDNIPESGSFKEESTIVSDLPETEKKALQELKQLIQEALHKHEFSAPQNNHPPKDEKHEDATDNKEEQKPVEEEKEHAVHAAADAADVAEATEKEAAEVKESETETKVVEEKVAVTDATCVEEDGAKTVEAIEESVVPVTVSEEEAKVEADSASPEEVSIWGVPLLADERSDVILLKFLRARDFKVKDAFAMIKGTIRWRKEFGMEELLEEELGDDLEKAVYMHGFDKEGHPVCYNIYGEFQNKELYKKSFSDEEKRHRFLRWRIQFLEKSIRKLDFAPGGISTIVQVNDLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAAEQLPVKYGGLSKDGEFGISDAVTEITVRPAAKHTVEFPVAENSQLSWEIRVIGWDVSYGAEFVPSSEGSYTVIIQKARKVASSEEPVLCNNYKIGEPGKVVLTIDNQSSKKKKLLYRLKVKPSSSD* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02634 553 ProSiteProfiles GOLD domain profile. 446 547 IPR009038 -
Phac9g02634 553 MobiDBLite consensus disorder prediction 1 15 - -
Phac9g02634 553 PRINTS Cellular retinaldehyde-binding protein signature 231 253 - -
Phac9g02634 553 PRINTS Cellular retinaldehyde-binding protein signature 394 413 - -
Phac9g02634 553 MobiDBLite consensus disorder prediction 74 96 - -
Phac9g02634 553 MobiDBLite consensus disorder prediction 34 65 - -
Phac9g02634 553 MobiDBLite consensus disorder prediction 1 162 - -
Phac9g02634 553 CDD SEC14 278 437 IPR001251 -
Phac9g02634 553 PANTHER PATELLIN-1 123 550 IPR044834 GO:0008289
Phac9g02634 553 SUPERFAMILY CRAL/TRIO N-terminal domain 74 269 IPR036273 -
Phac9g02634 553 Gene3D GOLD domain 452 548 - -
Phac9g02634 553 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 267 442 IPR001251 -
Phac9g02634 553 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 447 549 IPR036598 -
Phac9g02634 553 SMART CRAL_TRIO_N_2 228 253 IPR011074 -
Phac9g02634 553 SUPERFAMILY CRAL/TRIO domain 277 439 IPR036865 -
Phac9g02634 553 Gene3D - 209 451 IPR036865 -
Phac9g02634 553 SMART sec14_4 272 439 IPR001251 -
Phac9g02634 553 MobiDBLite consensus disorder prediction 104 162 - -
Phac9g02634 553 Pfam CRAL/TRIO, N-terminal domain 204 251 IPR011074 -
Phac9g02634 553 Pfam CRAL/TRIO domain 276 436 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02634 Phac-Chr9 24775255 24779071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02634 232 431 Acyl Lipid Metabolism Gene Families AT5G47730 27.778 6.11e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02634 - - gmx:100805585 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02634 9 24775255 24779071 Phac9g02634 9 24775255 24779071 ECH
Phac2g04187 2 40724676 40728388 Phac9g02634 9 24775255 24779071 PCT