Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04187 ATGGCTGAGGAGGTTCCAAACCAAGCACCACCTTCTCAAGAGTCTGTGGTTCAAGTGGAGGAAGTCGTGGTAACTGATGTTCCTCAGCCGGCAGACAAAACACCGCCACCACCAGCCACAACAACCACTGTTCCTGTTGAGAGAGATTCACCGCCACAACCTGAGCCTGAGGCGCCGGAGAAGAAGCCTGTTGAGGAAACCGTCACTCTCGAGACTCATCTCTCCAAACCCAACAACGCTGATGATAACAGCAATGATGAGAAAGTCTCTGAATTCAAGGAAGAAAGCACCAAACTTTCCGACCTATCGGAGAACCAAAACAAGGCACTCCAAGACCTCAAGAAGCTCGTTCAAGAAGCTCTCAAAAGTCACGAGTTTTCCTCCAATGATGAAAAGAAGACACCTCCACCAACGGCTTTAACTGCTGAAAAGGAAGAACAAGAGCAGCCGCAGCAACAACAAGAAGTTGTGACTGAAGCTGAAACTGATGCTGCCCCAGAAAAAACTGATGAAGAAGTTGAAACAAAGGAAGAGGAACAAGGAGAAAAAGAAGAAGGGAAGAAGGAGGAAGTGAGAGAAACAAAGGAAGATGCTACTGTGGATGACGATGGAGCAAAAACTGTGGAGGCCATTGAAGAGACCGTTGTTGCTGTATCTTCTACTGTTCAGCCTCAAGCTGAAGAGAAAACGGAAGCCAAAGATGAAGCTTCACCGCCACTTCCACCTGAAGAAGTTTCCATTTGGGGAGTGCCACTTCTTGCTGACGAGAGGAGCGATGTGATTCTTTTGAAGTTTCTGCGCGCGAGAGAGTTTAAAGTTAAGGAGGCGTTCACGATGCTGAAGAACACGATCCGGTGGAGGAAGGAGTTTGGGATGGAGGAGCTGATGGAGGAGAAGCTGGGGGATGAGTTGGAGAAGGTGGTGTTCATGCATGGCTTTGACAAGGAGGGCCACCCGGTGTGTTACAATATATACGGGGAGTTCCAGAACAAGGACTTGTACAGGAAGACTTTTTCTGATGAGGAGAAGAGGGAGAAGTTCCTCAGATGGAGAATTCAGTTTCTGGAAAAGAGTATAAGGAAGTTGGATTTCAACCCTGGTGGCATTTGCACCATTGTTCAGGTCAATGATCTCAAGAACTCTCCTGGACCTGCCAAGTGGGAACTAAGACAAGCCACCAAAAATGCCCTACAATTGCTTCAAGACAATTATCCTGAATTTGTAGCCAAACAGGTGTTCATTAATGTACCATGGTGGTACCTGGCAGTGAATAGGATGATAAGCCCTTTTCTTACTCAGAGGAGTAAGAGTAAGTTTGTCTTTGCTGGACCTTCTAAATCAACGGAAACCCTTTTGAGATACATAGCTCCGGAGCAGCTTCCGGTGAAGTACGGTGGATTAAGCAAAGATGGGGAGTTCGGAAATACCGATGCTGTTACAGAAATCACAGTGAGGCCGGCAGCAAAGCATACTGTGGAATTTTCAGTTACAGAGAAGTGTTTACTCTCTTGGGAGCTGAGAGTAATAGGGTGGGAAGTAAGCTATGGTGCAGAATTTGTGCCAGATTCAGAAGGAAGCTATACAGTAATTGTCCAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAGCCAGTGGTTTGCAACAGTTTTAAGGTTGGTGAACCTGGAAAAGTTGTTCTCACAATTGACAACACAAGCTCCAAGAAGAAGAAGCTCTTGTACCGCTTGAAGACCAAGCCTTCCCCCTCAGATTAA 1752 0.4658 MAEEVPNQAPPSQESVVQVEEVVVTDVPQPADKTPPPPATTTTVPVERDSPPQPEPEAPEKKPVEETVTLETHLSKPNNADDNSNDEKVSEFKEESTKLSDLSENQNKALQDLKKLVQEALKSHEFSSNDEKKTPPPTALTAEKEEQEQPQQQQEVVTEAETDAAPEKTDEEVETKEEEQGEKEEGKKEEVRETKEDATVDDDGAKTVEAIEETVVAVSSTVQPQAEEKTEAKDEASPPLPPEEVSIWGVPLLADERSDVILLKFLRAREFKVKEAFTMLKNTIRWRKEFGMEELMEEKLGDELEKVVFMHGFDKEGHPVCYNIYGEFQNKDLYRKTFSDEEKREKFLRWRIQFLEKSIRKLDFNPGGICTIVQVNDLKNSPGPAKWELRQATKNALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRSKSKFVFAGPSKSTETLLRYIAPEQLPVKYGGLSKDGEFGNTDAVTEITVRPAAKHTVEFSVTEKCLLSWELRVIGWEVSYGAEFVPDSEGSYTVIVQKARKVASSEEPVVCNSFKVGEPGKVVLTIDNTSSKKKKLLYRLKTKPSPSD* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04187 583 MobiDBLite consensus disorder prediction 1 202 - -
Phac2g04187 583 Gene3D GOLD domain 480 577 - -
Phac2g04187 583 MobiDBLite consensus disorder prediction 53 69 - -
Phac2g04187 583 Coils Coil 99 123 - -
Phac2g04187 583 MobiDBLite consensus disorder prediction 144 159 - -
Phac2g04187 583 SUPERFAMILY CRAL/TRIO N-terminal domain 99 298 IPR036273 -
Phac2g04187 583 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 478 576 IPR036598 -
Phac2g04187 583 ProSiteProfiles GOLD domain profile. 476 577 IPR009038 -
Phac2g04187 583 MobiDBLite consensus disorder prediction 165 179 - -
Phac2g04187 583 SUPERFAMILY CRAL/TRIO domain 307 469 IPR036865 -
Phac2g04187 583 Pfam CRAL/TRIO domain 306 466 IPR001251 -
Phac2g04187 583 PRINTS Cellular retinaldehyde-binding protein signature 261 283 - -
Phac2g04187 583 PRINTS Cellular retinaldehyde-binding protein signature 424 443 - -
Phac2g04187 583 MobiDBLite consensus disorder prediction 219 242 - -
Phac2g04187 583 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 297 472 IPR001251 -
Phac2g04187 583 Pfam CRAL/TRIO, N-terminal domain 243 282 IPR011074 -
Phac2g04187 583 SMART CRAL_TRIO_N_2 258 283 IPR011074 -
Phac2g04187 583 CDD SEC14 303 467 IPR001251 -
Phac2g04187 583 PANTHER PATELLIN-1 155 580 IPR044834 GO:0008289
Phac2g04187 583 MobiDBLite consensus disorder prediction 80 101 - -
Phac2g04187 583 Gene3D - 222 289 - -
Phac2g04187 583 MobiDBLite consensus disorder prediction 180 202 - -
Phac2g04187 583 SMART sec14_4 302 469 IPR001251 -
Phac2g04187 583 Gene3D - 291 479 IPR036865 -
Phac2g04187 583 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04187 Phac-Chr2 40724676 40728388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04187 262 461 Acyl Lipid Metabolism Gene Families AT1G55840 27.014 7.45e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04187 - - gmx:100788197 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04187 2 40724676 40728388 Phac2g04187 2 40724676 40728388 ECH
Phac2g04187 2 40724676 40728388 Phac9g02634 9 24775255 24779071 PCT