Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00404 ATGGGTAGGAGGAGAATGCAACTGGTTGAAGAGAAAAGTAATGGGTTTTTCTCTGTCAGCTGCCTGGGGTTCCAATCCGAAGATAGGTGCTACCAGTTCGGAGGCTTGTTTGCCAGTGTTGGTCAGATGGGAATGGGGGTTGGCGTGCAACCGAGCGACCCTTCTGATTCGCGCGACAGTGGTGGCACGAAGTTCCCCTTCAATGAACTGTTCATCAAGTACCAGGGAAAAGATGAGGTTGTTGAAGAAAGGGTTGGTGGCAAGAAGAGAAAGGGTGGTGTTTCACTACGGCTTAAGATCAAAAACCCTGCTCTGAGAAGGTTGTTTAGTGGGGCAATAGCTGGGGCTGTGTCTCGGACTGCTGTGGCACCTTTGGAGACTATAAGAACTCTTATGATGGTGGGGGGTAGTAACCATTCCACCACTGAGGTGTTCCACAATATCGTGAAAACTGATGGCTGGAAGGGCTTGTTTAGGGGTAATTTTGTTAATGTCATTCGGGTTGCGCCTAGCAAGGCCATTGAGCTATTTACTTTCGATACAGTGAACAAGAACCTATCCCCGAAGCCTGGGGAGAAGTCGAAATTCCCAATTCCTGCATCATTGATTGCAGGTGCCTGTGCTGGAGTGACTTCAACTATATGTACATATCCTCTTGAATTAGTCAAGACTCGACTAACTGTCCAGAGGGATGTTTATAATGGTCTGCTTCATGCATTCGTGAAAATAATTCGAGAAGAGGGTCCTGCAGAACTTTACAGTGGGCTTGCAGCTAGTCTCATCGGAGTTGTCCCCTATGCTGCAGCCAATTACTATGCCTATGACACTTTAAAGAAAGCATACAAGAAAGTTTTTAAACAAGAGAAGGTGGGGAATATTGAAACCCTTTTGATCGGTTCGGTAGCTGGTGCTATTTCAAGTAGTTCAACTTTTCCATTGGAGGTAGCTCGCAAGCAAATGCAGCTTGGTACCATCAGTGGAAGGCAGGTTTACAAGGATGTGTTTCATGCCCTTGCATGCATACTAGAACAAGAAGGGATGCAAGGTTTATTCAGAGGGTTGGTACCTAGTTGCATGAAGTTGATACCAGCCGCTGGAATCTCTTTCATGTGCTACGAAGCATGCAAGAGGGTATTTCTAGAGAACGATGAGGAGGATTAG 1161 0.4634 MGRRRMQLVEEKSNGFFSVSCLGFQSEDRCYQFGGLFASVGQMGMGVGVQPSDPSDSRDSGGTKFPFNELFIKYQGKDEVVEERVGGKKRKGGVSLRLKIKNPALRRLFSGAIAGAVSRTAVAPLETIRTLMMVGGSNHSTTEVFHNIVKTDGWKGLFRGNFVNVIRVAPSKAIELFTFDTVNKNLSPKPGEKSKFPIPASLIAGACAGVTSTICTYPLELVKTRLTVQRDVYNGLLHAFVKIIREEGPAELYSGLAASLIGVVPYAAANYYAYDTLKKAYKKVFKQEKVGNIETLLIGSVAGAISSSSTFPLEVARKQMQLGTISGRQVYKDVFHALACILEQEGMQGLFRGLVPSCMKLIPAAGISFMCYEACKRVFLENDEED* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00404 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 290 378 IPR018108 -
Phac9g00404 386 PANTHER SOLUTE CARRIER FAMILY 25 102 379 - -
Phac9g00404 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 185 IPR018108 -
Phac9g00404 386 Gene3D Mitochondrial carrier domain 99 384 IPR023395 -
Phac9g00404 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 196 280 IPR018108 -
Phac9g00404 386 Pfam Mitochondrial carrier protein 290 382 IPR018108 -
Phac9g00404 386 Pfam Mitochondrial carrier protein 103 186 IPR018108 -
Phac9g00404 386 Pfam Mitochondrial carrier protein 197 283 IPR018108 -
Phac9g00404 386 SUPERFAMILY Mitochondrial carrier 103 374 IPR023395 -
Phac9g00404 386 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Phac9g00404 386 PRINTS Mitochondrial carrier protein signature 107 120 IPR002067 GO:0055085
Phac9g00404 386 PRINTS Mitochondrial carrier protein signature 160 180 IPR002067 GO:0055085
Phac9g00404 386 PRINTS Mitochondrial carrier protein signature 299 321 IPR002067 GO:0055085
Phac9g00404 386 PRINTS Mitochondrial carrier protein signature 211 229 IPR002067 GO:0055085
Phac9g00404 386 PRINTS Mitochondrial carrier protein signature 120 134 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00404 Phac-Chr9 2578214 2582061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00404 1 385 Organic Solute Cotransporters AT4G32400 61.990 5.02e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00404 K14684 - gmx:100810035 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00404 9 2578214 2582061 Phac9g00404 9 2578214 2582061 ECH
Phac1g00702 1 5596483 5599754 Phac9g00404 9 2578214 2582061 PCT