Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00702 ATGGGTGGGAGAGGGATCAAGCTCTTTGATGAAGAAAGGAATGGTCTTTTTTCAATTTCCAATTTTGGGTCTCAATGGGGTGGCGGTATTCACGACCCTGCGGCTATGGCTATGTTTGCCAGCGTTAGTCAAGTGGGAATGGGGTTTGGCGTTCAAGAGCCAAACCCTTCTGGTGATTCCCAGCACAATGGTGGCATGAACATTAGGATCCCTTGTACTGAGTTGTACGTTAGGTATGTTCAATCAGAGGGGAAGGTGAAGATTACTGGGGTTTCTGGGGAAGAAGAGGAGGTGGCGGGTGTTAAGGGGAAGAAAAAGGGTGCCTTTAAAGGGTTGAGGATCAAGGTGAAGAACCCTTCTCTTAGGAGGTTGATTAGTGGTGCCTTTGCTGGGGCAGTGTCACGGACCACTGTGGCACCCTTGGAGACCATTAGGACTCATTTGATGGTAGGAAGTAGTGGGAATTCTACTGGGGAGGTGTTCAACAATATCATGAAGACTGATGGATGGAAGGGCTTGTTTAGGGGTAATTTTGTTAATGTGATTCGGGTTGCACCAAGCAAGGCTATTGAGCTATTTGCATATGATACTGTAAACAAGAACCTCTCAGCAAAGCAAGGGGAGCAGCCTAAACTCCCTATTCCTCCATCATTGATTGCAGGTGCTTGTGCTGGAGTTACTTCAACGATATGCACATATCCTCTGGAGTTGCTAAAGACTCGACTAACAATCCAGAGGGGTGTTTATGATGGTCTGCTAGATGCATTCCTGAAAATAGTGAGAGAAGAGGGTGCTGGAGAACTTTACAGAGGCCTCACTCCCAGCCTAATTGGAGTAATACCATATGCTGCCACCAATTACTTTGCATATGACACCTTGAGGAAAGCATACAGAAAAATTTTCAAAAAAGAGAAGATTGGCAACATTGAAACCCTTCTGATAGGGTCTGCAGCTGGTGCTATTTCAAGTAGTGCCACCTTTCCTCTTGAAGTGGCCCGCAAGCACATGCAAGTGGGAGCCCTGAGTGGAAGGCAAATATACAAAAATGTGATTCATGCCCTTGCAAGCATTCTTGAGCAAGAAGGGATTCAAGGATTGTATAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAGGATACTCGTAGAGGACCAAGATGAGGAGTAG 1209 0.4624 MGGRGIKLFDEERNGLFSISNFGSQWGGGIHDPAAMAMFASVSQVGMGFGVQEPNPSGDSQHNGGMNIRIPCTELYVRYVQSEGKVKITGVSGEEEEVAGVKGKKKGAFKGLRIKVKNPSLRRLISGAFAGAVSRTTVAPLETIRTHLMVGSSGNSTGEVFNNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSAKQGEQPKLPIPPSLIAGACAGVTSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYAATNYFAYDTLRKAYRKIFKKEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQIYKNVIHALASILEQEGIQGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEDQDEE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00702 402 Gene3D Mitochondrial carrier domain 115 400 IPR023395 -
Phac1g00702 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 296 IPR018108 -
Phac1g00702 402 SUPERFAMILY Mitochondrial carrier 119 390 IPR023395 -
Phac1g00702 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 306 394 IPR018108 -
Phac1g00702 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 201 IPR018108 -
Phac1g00702 402 PRINTS Mitochondrial carrier protein signature 176 196 IPR002067 GO:0055085
Phac1g00702 402 PRINTS Mitochondrial carrier protein signature 136 150 IPR002067 GO:0055085
Phac1g00702 402 PRINTS Mitochondrial carrier protein signature 269 287 IPR002067 GO:0055085
Phac1g00702 402 PRINTS Mitochondrial carrier protein signature 123 136 IPR002067 GO:0055085
Phac1g00702 402 PRINTS Mitochondrial carrier protein signature 227 245 IPR002067 GO:0055085
Phac1g00702 402 PRINTS Mitochondrial carrier protein signature 315 337 IPR002067 GO:0055085
Phac1g00702 402 Pfam Mitochondrial carrier protein 306 397 IPR018108 -
Phac1g00702 402 Pfam Mitochondrial carrier protein 119 203 IPR018108 -
Phac1g00702 402 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Phac1g00702 402 PANTHER SOLUTE CARRIER FAMILY 25 116 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00702 Phac-Chr1 5596483 5599754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00702 303 402 Organic Solute Cotransporters AT4G32400 31.373 1.06e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00702 K14684 - gmx:100816041 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00702 1 5596483 5599754 Phac1g00702 1 5596483 5599754 ECH
Phac1g00702 1 5596483 5599754 Phac9g00404 9 2578214 2582061 PCT