Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00386 ATGTCTCAAGTCTTCAGCTTTTCAGGAAATGATGATTTTTGTCCTGGGGGTCGTATATATCCTAACCCCAAGGAACCATGTCTCTTTTTGTCTCTTGGCCGTTCAGTTGATTACTTTCCTCTTCAGAAGAGATCTCGCGTCAGTGTTTCATTTGATATCAATCGAGAATGGTTTGATGAGCAGAAGCAGAAGACATCTATTGAATCTTTGCCAGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGCTGGCCAAGATAGGAGCGTCTGTGCTTCTGTATCCAAGCGCTGGCTTATGCTTCTAAGCAGTATTTGTAAGAATGAAGTCTGCAGCAATGGAAGTACCGGAGATTCTAATGTGGGTGGTGATGATGATCAGGGATTTAGCAACGAAGGATATCTATCCCGAAGCTTGGAGGGAAAGAAGGCAACAGATGTTAGACTTGCTGCCATTGCTGTTGGAACAGCCTCTCGAGGAGGGCTGGGGAAGCTTACTATTCGTGGATGCAATTCTGGTCGTGGGGTGACTAACGTAGGTCTCAAGGCCATTGCTCATGGATGCCCTTCTCTAAAGGTTTTCTCTGTGTTTGATGTTGCTACTATTGATGATGAAGGCCTAATTGAGATTGCTAGCGGGTGTCATAAGTTAGAGAAGCTTGACCTCTGCAAGTGTCCCAATATTTCTGACAAGACTTTAATTGCAGTCTCGAAGAAGTGTCCAAATCTGGCTGAGTTGTCAATTGAGTCATGTCCCAACATTGGTAACATAGGTCTACAAGCTATTGGGAAGTTGTGTCCCAATCTAAGGTCTATATCAATCAAGGGTTGCTCCGGAGTTGGTGATCAGGGAGTTTGTGGCCTTTTGTCTTCAACTTCTTATGTTCTATCAAAGGTGAAGCTTGAGTCGTTGATGGTGTCTGATCTCTCTCTAGCAACGATTGGGCATTATGGCTTTCAAGTTACCGATCTTGTCCTAAGTTGCCTCCCAAATGTCAGCGAGAAAGGGTTCTGGGTTATGGGTAATAGCCGTGGACTGCAGAAACTGAATTCAATCACAATCGAAGGCTGCCAAGGATTGACAGACACAGGGATCGAAGCTATTGGAAAGGGTTGTCCAAATGTGAAAAACTTCCAGCTTCGTAAGTGTGCATTTCTGTCAGACAAGGGGTTGGTTTCATTTACCAGGGCTGCTCTATCAATTGAGAGCCTACAGTTGCAGGAATGCCACAGAATTACCCAAATTGGGCTTTTTGGCGTCTTTTTTCACTGTGCTGCCAAACTGAAGGTTCTTACTCTGATTAGCTGCTATGGGATCAAAGATCTGAACGCTGATTTGCCAGCAATGTCTCCTTGTGAATCATTTTGGTCTCTAACAGTCCGTGACTGCCCTGAATTTGGCGATGCTAATCTTGCTTTACTTGGAAAACTGTGTCCTCAGCTTAGGCATGTTGAATTGAGTGGACTTCAGAGAGTAACAGACGCAGGGTTTCTTCCACTGCTGGAGTGTTCTGAGACTGGTCTGACAACAGTTAGTCTAAGGGGATGTATAAATGTGACGGACAGAGTAGTTTTGCCTATTGTGAATTCACATGGATGGACTCTTCAGGTGCTATGCCTTGATGGTTGTAAAAGAGTTACCGATGCAAGCATGATGGCAATTGCAGGCAATTGTCCGATGCTGTCTGATCTTGATGTTTCCAAGTGTGCAATCACCGATACCGGTATTGCAGCTCTTGCACGCGGAAATCTGATCAGCCTGGAGATACTTTCTTTGGCAGGTTGTATATCGGTTTCAGACAAGAGCATGCCTGCATTGAAAAAACTGGGTCAATCACTTGCAGGATTGAATATCAAGCGTTGCAGTGCAATCAGCAGCCGAGGTGTCAGCAAGCTTCAGGAACATCTCTGGACTTGTGACATCCTCTACTGA 1932 0.4493 MSQVFSFSGNDDFCPGGRIYPNPKEPCLFLSLGRSVDYFPLQKRSRVSVSFDINREWFDEQKQKTSIESLPDECLFEILRRLPAGQDRSVCASVSKRWLMLLSSICKNEVCSNGSTGDSNVGGDDDQGFSNEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLTIRGCNSGRGVTNVGLKAIAHGCPSLKVFSVFDVATIDDEGLIEIASGCHKLEKLDLCKCPNISDKTLIAVSKKCPNLAELSIESCPNIGNIGLQAIGKLCPNLRSISIKGCSGVGDQGVCGLLSSTSYVLSKVKLESLMVSDLSLATIGHYGFQVTDLVLSCLPNVSEKGFWVMGNSRGLQKLNSITIEGCQGLTDTGIEAIGKGCPNVKNFQLRKCAFLSDKGLVSFTRAALSIESLQLQECHRITQIGLFGVFFHCAAKLKVLTLISCYGIKDLNADLPAMSPCESFWSLTVRDCPEFGDANLALLGKLCPQLRHVELSGLQRVTDAGFLPLLECSETGLTTVSLRGCINVTDRVVLPIVNSHGWTLQVLCLDGCKRVTDASMMAIAGNCPMLSDLDVSKCAITDTGIAALARGNLISLEILSLAGCISVSDKSMPALKKLGQSLAGLNIKRCSAISSRGVSKLQEHLWTCDILY* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00386 643 PANTHER UNCHARACTERIZED 346 523 - -
Phac9g00386 643 SMART LRR_CC_2 240 265 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 214 239 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 584 609 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 610 635 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 188 213 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 398 423 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 372 397 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 346 371 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 478 503 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 532 557 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 558 582 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 505 530 IPR006553 -
Phac9g00386 643 SMART LRR_CC_2 266 291 IPR006553 -
Phac9g00386 643 FunFam EIN3-binding F-box protein 1 60 109 - -
Phac9g00386 643 CDD F-box_AtTIR1-like 67 104 - -
Phac9g00386 643 Gene3D Ribonuclease Inhibitor 446 642 IPR032675 -
Phac9g00386 643 Gene3D Ribonuclease Inhibitor 59 291 IPR032675 -
Phac9g00386 643 Gene3D Ribonuclease Inhibitor 292 445 IPR032675 -
Phac9g00386 643 FunFam EIN3-binding F-box protein 1 134 252 - -
Phac9g00386 643 SMART fbox_2 70 111 IPR001810 GO:0005515
Phac9g00386 643 FunFam EIN3-binding F-box protein 1 504 641 - -
Phac9g00386 643 FunFam EIN3-binding F-box protein 1 253 443 - -
Phac9g00386 643 Pfam F-box domain 68 106 IPR001810 GO:0005515
Phac9g00386 643 SUPERFAMILY RNI-like 163 639 - -
Phac9g00386 643 Pfam Leucine Rich repeat 557 580 IPR001611 GO:0005515
Phac9g00386 643 Pfam Leucine Rich repeat 239 262 IPR001611 GO:0005515
Phac9g00386 643 SUPERFAMILY F-box domain 62 104 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00386 Phac-Chr9 2464798 2468479 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00386 K14515 - gmx:100805418 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00386 9 2464798 2468479 Phac9g00386 9 2464798 2468479 ECH
Phac1g00687 1 5468903 5472806 Phac9g00386 9 2464798 2468479 PCT